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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pmkQ_

Fold library idPDB HeaderMoleculeTitle
c7pmkQ_3.20PDB header: replicationChain: Q: PDB Molecule: dna polymerase epsilon catalytic subunit a;


Added to library: Sat Nov 13 08:42:40 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TWEVLQYKDSGEPGVLEVFVTINGKVQNITFHIPKTIYMKFKSQTMPLLIEKSSASLPNQLFKITLPESV
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Known secondary structure (DSSP)



SSTTTT
SS







B



 .........80.........90.........100.........110.........120.........130.........140
Sequence FLEEKENCTSIFNDENVLGVFEGTITPHQRAIMDLGASVGFEMKDLSMGFSMDIGYLLHFPEFFSLFKSW
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Known secondary structure (DSSP) TTSS
TTSSSSSSTT

T
S


GGG










TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDTITILVINASSLGQIYKQMFEKKKGKIETYSYLVDINFEFVYFKLYRRLSQETTKLKEERGLQFLLLL
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Known secondary structure (DSSP)
S


TTTTT







TT
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSPFITKLLGTIRLLNQMPIVKLSTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYIIDVL
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Known secondary structure (DSSP)

SS

S
TTS




TT

TTTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YARKLKKENIVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTIL
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Known secondary structure (DSSP) TTB




SSSSS


SGGGGS










S


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSAEFVHDAFSNDALNVLRGMLKEWWDEALKENSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKA
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Known secondary structure (DSSP)




SSS

TT
TT
TTSTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence LLQLVNEFSALGSTIVYADRNQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMD
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Known secondary structure (DSSP) TT
TT
S


TSGGGTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence KFNFSGLACTAVSQWQLKKFLSPIYQPEFEDWMMIILDSMLKTKQSYLKLNNSLNGFSHLFSKPLMKRVK
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Known secondary structure (DSSP) TT

TS
TTTT

TTTTGGGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KLFKNQQEFILDPQYEADYVIPVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELR
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Known secondary structure (DSSP) TT
TTTS



TTB



S
T
TT
GGGT

 .........640.........650.........660.........670.........680.........690.........700
Sequence EFAKVAEFKDPSLSLVVPDFLCEYCFFISDIDFCKAAPESIFSCVRCHKAFNQVLLQEHLIQKLRSDIES
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Known secondary structure (DSSP) TT
TTTS


SB


TTTTTTTS
B
SSS

B

 .........710.........720.........730.........740.........750.........760......
Sequence YLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDILLSCIADLTI
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Known secondary structure (DSSP) T

TTT

B

SSS
SS
TTS

SS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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