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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pliE_

Fold library idPDB HeaderMoleculeTitle
c7pliE_2.50PDB header: rna binding proteinChain: E: PDB Molecule: atp-dependent rna helicase dbpa;


Added to library: Sat Sep 10 13:39:00 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLF
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Known secondary structure (DSSP)

SGGGGS
S
T

S

TT



TTS
T

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKG
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Known secondary structure (DSSP) S


SSGGGSTT


TTS
TTS

S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDST
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Known secondary structure (DSSP) S


TT

TTTSS
SSSS


GGGGG
SS

S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDR
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Known secondary structure (DSSP) T


S

STT

SS
SSTTB

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEA
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Known secondary structure (DSSP) TTS
S
GGGSSS


TT

SS

SSTTSS
TT


GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence QRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
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Known secondary structure (DSSP) T



B



S





B

S
GGGGT

TTS


GGG
 .........430.........440.........450.......
Sequence HPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
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Known secondary structure (DSSP)
SSTSTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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