Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7pikC_

Fold library idPDB HeaderMoleculeTitle
c7pikC_2.68PDB header: dna binding proteinChain: C: PDB Molecule: transposon tn7 transposition protein tnsb;


Added to library: Wed Jun 22 00:17:38 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MWQINEVVLFDNDPYRILAIEDGQVVWMQISADKGVPQARAELLLMQYLDEGRLVRTDDPYVHLDLEEPS
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)


TT
SS
TTSSSS




T



TTGGGGG



 .........80.........90.........100.........110.........120.........130.........140
Sequence VDSVSFQKREEDYRKILPIINSKDRFDPKVRSELVEHVVQEHKVTKATVYKLLRRYWQRGQTPNALIPDY
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TTSSS

SST

TSSGGGG


G
 .........150.........160.........170.........180.........190.........200.........210
Sequence KNSGAPGERRGTKVTPEIERLFRLTIEKHLLNQKGTKTTVAYRRFVDLFAQYFPRIPQEDYPTLRQFRYF
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) GGTT
TT







TTT
SS



SS
GGGS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YDREYPKALGPGSRYEIDATIADIYLVDHHDRQKIIGRPTLYIVIDVFSRMITGFYIGFENPSYVVAMQA
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) S




TTS




B
SSSTT
B



TTT

SS

BTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FVNACSDKTAICAQHDIEISSSDWPCVGLPDVLLADRGELMSHQVEALVSSFNVRVESAPPRRGDAKGIV
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TS

TT



TTTS


SB
S

GGGS
TTS








 .........360.........370.........380.........390.........400.........410.........420
Sequence ESTFRTLQAEFKSFAPGIASLSVFEFTQIILRTILFRNNHLVMDKYDRDADFPTDLPSIPVQLWQWGMQH
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTTS




B








BT


SS



SS

TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence RTGSLRAVEQEQLRVALLPRRKVSISSFGVNLWGLYYSGSEILREGWLQRSTQHLEAAYDPVLVDTIYLF
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) T



B


TS
TTTT
TTT



TT
SS
 .........500.........510.........520.........530.........540.........550.......
Sequence PQVGSRVFWRCNLTERSRQFKGLSFWEVWDIQAQEKHNKANAKQDELTKRRELEAFIQQTIQKANKL
Predicted secondary structure


















SS confidence


































































Known secondary structure (DSSP) SSTT
S


GGGGGGTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D