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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pbkA_

Fold library idPDB HeaderMoleculeTitle
c7pbkA_2.80PDB header: viral proteinChain: A: PDB Molecule: dna polymerase i;


Added to library: Sat Nov 20 09:12:59 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLMKLDWERTGRRMGFIDLSKYEVWSYDTECTGLQYKVDKVFGFSIATPDGQSGYFDVREQPESLQWLAE
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Known secondary structure (DSSP)


SS

S


S

GGG
S
S
S
TTTS

TTS
TTT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVEPYKGTIVCHNASFDYRMSLHSGIKLPLSQIDDTGIRACCINEHESTIFPWTRGRAGDYSLDYLAKKY
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Known secondary structure (DSSP) TT

SSSTT



GGG
TTSS


TT

SS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGAQKYAEIYDELAALFGGKATRKTQMPNLYRAPSGLVRKYACPDAELTLELWLEQEELIKKRGLERIVA
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Known secondary structure (DSSP)




T
S
SSGGGGGGS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence FERKVMPTLIRTEARGVRVDLDYAEQAIFKMDGVVRENQAKMFALAGREFNPNSPKQVREVFGAKEEGGV
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Known secondary structure (DSSP)

TS


TT
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence WKSRDGTILERTATGNPCLDADALRSMTDPLAAAVLELRSNIKTKDTFLAKHVVEHSVGGRVYPNINQMK
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Known secondary structure (DSSP)
TT


B
TTSSB

ST











T
BTT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GEDGGTGTGRLSYTGPALQQIPSRNKRIAAIIKPAFLPEEGQLWLDSDMASFEVRIFAHLVAAYNPAIAK
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Known secondary structure (DSSP)
TTS

SSS

SS
GGGS
SS
GGG

TT
TTGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence AYAENPELDLHQWVGDLMGIPRNASYSGQPNAKQMNLGMIFNRGDGAVADSLGMPWEWCEFIRYKKAGRE
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Known secondary structure (DSSP)
TT

T

SS
SSTT


TT

T




 .........500.........510.........520.........530.........540.........550.........560
Sequence AKSIIAAYHSQIQGVKTLATRAQKIAEERGWIQTAHGRRLRFPNGYKSYKASGILIQATAADENKENWLR
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Known secondary structure (DSSP) STTTS
TT


GGGTTGGG
 .........570.........580.........590.........600.........610.........620....
Sequence IEDALGSDGSMILNTHDSYSMSVDENWKPIWERVKKAVERQTLRVPLLLEFDGVGKNWAEAKGL
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Known secondary structure (DSSP) GGGTT
SS
B

SSS
B
SST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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