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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7p3bA_

Fold library idPDB HeaderMoleculeTitle
c7p3bA_2.30PDB header: ligaseChain: A: PDB Molecule: rna-splicing ligase rtcb homolog;


Added to library: Sat Dec 25 08:43:49 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGFLPAMKQIGNVAALP
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Known secondary structure (DSSP)

TTTT
TTSSTT
SS





S

TST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQA
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Known secondary structure (DSSP) TB
S


SSS
TTSTT

GGGT
SSTT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence MFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGL
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Known secondary structure (DSSP) S

STT


SS


TTTSS
TSGGGG

TT

GGGS
G
 .........220.........230.........240.........250.........260.........270.........280
Sequence PQLGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKI
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Known secondary structure (DSSP) GGTT


STT
S
TT

STT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIA
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Known secondary structure (DSSP)

SSGGG

TTSTTS
TTTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence KVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTT
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Known secondary structure (DSSP) TTS



TT
TTS
GGGTTT

B

TTS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence CHGAGRALDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG
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Known secondary structure (DSSP)

BS
B


TT
S
GGGGGGG
GGGB

TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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