Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7p34A_

Fold library idPDB HeaderMoleculeTitle
c7p34A_3.59PDB header: transport proteinChain: A: PDB Molecule: peptide antibiotic transporter sbma;


Added to library: Sat Sep 18 08:45:33 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQIPISAARFWSLDFLIFYAYYIVCVGL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

SSSSS
TSSTT

SS


TT



SSGGGGTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FALFWFIYSPHRWQYWSILGTALIIFVTWFLVEVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGV
Predicted secondary structure


SS confidence





































































Known secondary structure (DSSP) S

TT
TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence FLGIALIAVVISVLNNFFVSHYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFI
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) T
TTTTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NAIMTLIAFLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYR
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TTS


BTTTB

SSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLG
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP) TT
TTS

TTTTTTT
S
TT
 .........360.........370.........380.........390.
Sequence LMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEH
Predicted secondary structure


SS confidence








































Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D