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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ozrA_

Fold library idPDB HeaderMoleculeTitle
c7ozrA_4.50PDB header: virusChain: A: PDB Molecule: nucleocapsid;


Added to library: Sat Mar 4 09:52:24 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVLKAFERFTIEQELQDRGEEGSIPPETLKSAVKVFVINTPNPTTRYQMLNFCLRIICSQNARASHRVGA
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Known secondary structure (DSSP)
T
SS
S













S

T
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LITLFSLPSAGMQNHIRLADRSPEAQIERCEIDGFEPGTYRLIPNARANLTANEIAAYALLADDLPPTIN
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Known secondary structure (DSSP) TTSSSTTSSS

SSSS

SSS


S


TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGTPYVHADVEGQPCDEIEQFLDRCYSVLIQAWVMVCKCMTAYDQPAGSADRRFAKYQQQGRLEARYMLQ
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Known secondary structure (DSSP) SSSSBTT
STTTS


SGGGGTTSS
SS
SSSTSSS
TTS
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence PEAQRLIQTAIRKSLVVRQYLTFELQLARRQGLLSNRYYAMVGDIGKYIENSGLTAFFLTLKYALGTKWS
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Known secondary structure (DSSP)
T

SS

TSS
S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PLSLAAFTGELTKLRSLMMLYRDIGEQARYLALLEAPQIMDFAPGGYPLIFSYAMGVGTVLDAQMRNYTY
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Known secondary structure (DSSP) SS

SSST
SGGGGTTTS

TS
GGGS
SGGGGS

 .........360.........370.........380.........390.........400...
Sequence ARPFLNGYYFQIGVETARRQQGTVDNRVADDLGLTPEQRTEVTQLVDRLARGR
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Known secondary structure (DSSP)

TT

STT



TTGGGTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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