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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7otjA_

Fold library idPDB HeaderMoleculeTitle
c7otjA_2.58PDB header: hydrolaseChain: A: PDB Molecule: atp-dependent dna helicase pif1;


Added to library: Sat Jul 10 08:52:41 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIILSNEQEYVLKQVLSGVSLFYTGSAGTGKSVLLRSIIKSLRDKYPKGVAVTASTGLAACNIGGITLHS
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Known secondary structure (DSSP)




TT

STTSS
TT
SSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FAGFGLGQGKVENLIKKIKRNKKAFTRWRETRVLIIDEISMVDGHLLNKLNEIAKNLRRNNRPFGGIQLV
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Known secondary structure (DSSP) T
TT

S



SGGGS
T

SGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence ACGDFYQLPPVVKVEVFFAFESSAWKETIQRTITLKEIFRQKGDQRFIDMLNNLRDGNVPDDTARDFCRL
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Known secondary structure (DSSP)
TTS










GGGS





TTTT
TTTS


GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence SRPLKCPEGIVPSELYATRYEVDMANSRKLNTIQGDVVVYNSVDTGILPEPQKTQVLTNFLAPQVLNLKV
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Known secondary structure (DSSP) GS




TT


SSS
S


SS
TTT
SS
S
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GAQVMCIKNFDDQLVNGTLGKVIDFVDRDTYMSKLKDDLMKDYKNKKYPLVKFLLPDGITFRTVVVEPEQ
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Known secondary structure (DSSP) T

S

SSSS
TT


SS



TT



S


TTSS



 .........360.........370.........380.........390.........400.........410.........420
Sequence WTTEDEDGTVLVSRIQFPLILAWSLSIHKSQGQTLSKVVVDMKKIFENGQAYVALSRAVSRAGLQVLNFN
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Known secondary structure (DSSP)
TTS

S
STT

BSS
TT

STTTBS
GGGS

 .........430........
Sequence RSKVASHRKVIEFYKNLS
Predicted secondary structure


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Known secondary structure (DSSP) GGG






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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