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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7oqhD_

Fold library idPDB HeaderMoleculeTitle
c7oqhD_3.32PDB header: transcriptionChain: D: PDB Molecule: transcription termination factor rho;


Added to library: Sat Feb 12 08:37:41 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVQPVAGILDVLDNYAFVRTSGYLPGPHDVYVSMNMVRKNGMRRGDAVTGAVRVPKEQKFNPLVRLDSIN
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Known secondary structure (DSSP)
B



SSS

TTTSS

SS

B

TT

TT







S
BT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GGSVEDAKKRPEFGKLTPLYPNQRLRLETSTERLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIAN
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Known secondary structure (DSSP) TS
STT




STTS



S
SSB





SS

S

BTT

TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVEQGKDVVVL
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Known secondary structure (DSSP)
TTS


STTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFE
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Known secondary structure (DSSP)
S


S

TTTSS
SGGGT

B
TTS

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQL
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Known secondary structure (DSSP) TTTS
S
TT
SS
TTGGGTS
S
T
 .........360....
Sequence RKTKNNYEFLVQVS
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SS confidence













Known secondary structure (DSSP)
SS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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