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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7oq4C_

Fold library idPDB HeaderMoleculeTitle
c7oq4C_3.27PDB header: viral proteinChain: C: PDB Molecule: dna-directed rna polymerase subunit a'';


Added to library: Sat Aug 28 08:27:38 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIDEKLKGYIDKRLNEIKDKIPDKLHEDLRAAIMDINGVELTEEDIDRIIDLTIREYQQSLIEPGEAIGV
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Known secondary structure (DSSP)


TTSS


SS


S

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence VTAQSVGEPGTQMTLRTFHFAGIRELNVTLGLPRLIEIVDARKVPSTPMMTIYLTDEYKTDKDKALDIAR
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Known secondary structure (DSSP) GGGGT





B
TT
SS
B


STT
SS
SS


TTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RIEYTRVENVVSSVSVDISNMSITLQFDQEMLKDKGVSIEEIKKIITKLKLGEIRIEDNDEYSFTIYFEK
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Known secondary structure (DSSP) SS
TTTT
T



S


STTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IDSIMALFKMREKILNTKIKGVKGIKRAIVQKKGDEYVIITDGSNLEGIMNVTGVDINKIQTNNIHEVEE
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Known secondary structure (DSSP)

ST
S
TT


SSSSSS

STTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VLGIEAARELISREIKKVLEEQGLDVDMRHIVLVSDIMTRTGDIRQIGRHGVTGEKSSVLARAAFEVTVK
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Known secondary structure (DSSP) TT



TTTSS


SSTTTTTT

S
STT
S
 .........360.........370.........380.........390...
Sequence HLLDAAARGEREEFKGVIENIIIGQPIRLGTGIVELTMKPNMR
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Known secondary structure (DSSP) T





SST


SSGGGT






TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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