PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7opaD_

Fold library id	PDB Header	Molecule	Title
c7opaD_	2.00	PDB header: transferase	Chain: D: PDB Molecule: purine nucleoside phosphorylase deod-type;

Links to external resources
Added to library: Tue Jun 21 21:21:01 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T P H I N A K I G D F Y P Q C L L C G D P L R V S Y I A K K F L Q D A K E I T N V R N M L G F S G K Y K G R G I S L M G H G M G I A S C T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S S
S S
G G G
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I Y V T E L I K T Y Q V K E L L R I G T C G A I S P K V G L K D I I M A T G A S T D S K T N R V R F L N H D L S A T P D F E L S L R A Y Q T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S T T
T T
S
S T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A K R L G I D L K V G N V F S S D F F Y S F E T H A F D L M A K Y N H L A I E M E A A G L Y A T A M E L N A K A L C L C S V S D H L I T K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S
S
G G G T T S S T T
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence A L S P K E R V E S F D N M I I L A L E M M S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	P	H	I	N	A	K	I	G	D	F	Y	P	Q	C	L	L	C	G	D	P	L	R	V	S	Y	I	A	K	K	F	L	Q	D	A	K	E	I	T	N	V	R	N	M	L	G	F	S	G	K	Y	K	G	R	G	I	S	L	M	G	H	G	M	G	I	A	S	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S					T	T	S	S		S						S																						G	G	G									T	T										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	Y	V	T	E	L	I	K	T	Y	Q	V	K	E	L	L	R	I	G	T	C	G	A	I	S	P	K	V	G	L	K	D	I	I	M	A	T	G	A	S	T	D	S	K	T	N	R	V	R	F	L	N	H	D	L	S	A	T	P	D	F	E	L	S	L	R	A	Y	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S															S	T	T			T	T											S		S						T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	R	L	G	I	D	L	K	V	G	N	V	F	S	S	D	F	F	Y	S	F	E	T	H	A	F	D	L	M	A	K	Y	N	H	L	A	I	E	M	E	A	A	G	L	Y	A	T	A	M	E	L	N	A	K	A	L	C	L	C	S	V	S	D	H	L	I	T	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T												S		S	S		S		G	G	G							T	T						S	S											T	T													T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	A	L	S	P	K	E	R	V	E	S	F	D	N	M	I	I	L	A	L	E	M	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B																					T