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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7okyZ_

Fold library idPDB HeaderMoleculeTitle
c7okyZ_4.14PDB header: transcriptionChain: Z: PDB Molecule: transcription elongation factor spt5;


Added to library: Sat Jul 17 08:38:00 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNL
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Known secondary structure (DSSP)




TT
TTSS





SS

SS
STT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLGYWNQQMVPIKEMTDVLKVVKEHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEF
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Known secondary structure (DSSP) STTTT


GGGTTTTT








TT

SSTTTT





SSS



TT

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence PAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQ
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Known secondary structure (DSSP)
TTT


TT

SSSSTT

SS
SSS


STT

S





TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVI
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Known secondary structure (DSSP)

TT
SSSS

SSTTS
STT




TT


TT


TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence DGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLANELIGQTVRISQGPYKGYIGVVKDATE
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Known secondary structure (DSSP) SSTTTT

SS
TT

GGGTGGG


STT

SSTTTT

S
 .........360.........370....
Sequence STARVELHSTCQTISVDRQRLTTV
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Known secondary structure (DSSP) SSSSS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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