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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ok9H_

Fold library idPDB HeaderMoleculeTitle
c7ok9H_3.36PDB header: hydrolaseChain: H: PDB Molecule: penicillin-binding protein 1;


Added to library: Sat Nov 6 08:54:22 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRGKIYDRNGKVLAEDVERYKLVAVFGRKGTNLTYQDKLKIEKMNLPETERFYPNGNFASHLIGRAQKNP
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Known secondary structure (DSSP)




TT







GGGGS
B
S
S



TTSSSS

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DTGELKGALGVEKIFDSYLSGSKGSLRYIHDIWGYIAPNKRGDDVHLTIDSNIQVFVEEALDGMVERYQP
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Known secondary structure (DSSP) TT

ST
SS

S



SSSTT








S


 .........150.........160.........170.........180.........190.........200.........210
Sequence KDLFAVVMDAKTGEILAYSQRPTFNPETGKDFGKKWANDLYQNTYEPGSTFKSYGLAAAIQEGAFDPDKK
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Known secondary structure (DSSP) TTT
BS

BTTTTBTTTSS
S


B

GGGGT


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YKSGHRDIMGSRISDWNRVGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKSWYERFGFGKSTKGMFDGE
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Known secondary structure (DSSP)
S

TT


TTSS

ST

TTTTS



SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence APGQIGWSNELQQKTSSFGQSTTVTPVQMLQAQSAFFNDGNMLKPWFVNSVENPVSKRQFYKGQKQIAGK
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Known secondary structure (DSSP)


B


SSTTSS
BB
TTTTTT


B

TTT






 .........360.........370.........380.........390.........400.........410.........420
Sequence PITKDTAEKVEKQLDLVVNSKKSHAANYRIDGYEVEGKTGTAQVAAPNGGGYVKGPNPYFVSFMGDAPKK
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Known secondary structure (DSSP)
S
STT
S
GGG
BTTB

B

B


B
SSSSSB

SSS
SSS
 .........430.........440.........450.........460.....
Sequence NPKVIVYAGMSLAQKNDQEAYELGVSKAFKPIMENTLKYLNVGKS
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Known secondary structure (DSSP) S
SSSSTTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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