PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7ojkL_

Fold library id	PDB Header	Molecule	Title
c7ojkL_	3.89	PDB header: viral protein	Chain: L: PDB Molecule: rna-directed rna polymerase l;

Links to external resources
Added to library: Sat Dec 4 08:39:56 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E D D M A C V K D L V S K Y L A D N E R L S R Q K L A F L V Q T E P R M L L M E G L K L L S L C I E I D S C N A N G C E H N S E D K S V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G S S
S T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R I L H D H G I L T P S L C F V V P D G Y K L T G N V L I L L E C F V R S S P A N F E Q K Y I E D F K K L E Q L K E D L K S V D I N L I P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
T T
S
S T T T G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I D G R T S F Y N E Q I P D W V N D K L R D T L F S L L R Y A Q E S N S L F E E S E Y S R L C E S L S M T S G R L S G V E S L N V L L D N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T
T T
T T S
S S
S
G G G G G S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S S H Y E E I I A S C H Q G I N N K L T A H E V K L Q I E E E Y Q V F R N R L R K G E I T G Q F L K V D K S R L L N D F N N L Y V D E V T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T T
T T T T S S
T T S T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence T K D N I E H L I Y Q F K R A S P I L R F L Y A N I G E G I K E C Q M Q Y W R S F L N K V K S L R I L N T R R K L L L I F D A L I L L A S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S S T S
T T T T T
S
T T T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence H D Q T R H K C S K G W L G S C F I S V N D R L V S L E S T K R D L E K W V G R R Q Q S E R S P P D K N Q I L I S M F Q K T I L K A T A A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
S S S
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence K D V G I S V E H Y K I N M E V I C P D S Y D L I L N F D V S G V V P T I S Y Q R T E D E K F P F I M G G V E L L E S T D L E R L S S L S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
T T S S
S
T
B
S
T T
S
S
S
T T S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence A L V N S M K T S S T V K L R Q N E F G P A R Y Q V V R C K E A Y C Q E F L L S G A E F Q L I Y Q K T G E C S K C Y A I N D N R V G E I C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S
S G G G G S S B
S S
S S S S
S S
S S S
S S S S
B

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence F Y A D P K R Y F P A I F S A E V L Q T T V S T M I S W V K D C S E L E E Q L C N I N S L T K M I L V L I L A H P S K R S Q K L L Q N L R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T T T
S T T S
G G G S S T S
G G G

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence F I M A Y V S D Y H H K D L I D K L R E E L I T D V E F L L Y R L V R A L V N L I L S E D V K S M M T N R F K F I L N I S Y M C H F I T K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
G G G S
S S
T T
S
T T T T T S
S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence T P D R L T D Q I K C F E K F L E P K L E F G H V S I N P A D V A T E E E L D D M V Y N A K K F L S K E G C T S I K G P D Y K K P G V S K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T T
S S
T
S S S S S
S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence F L S L L T S S F N N G S L F K E S E V K R E I K D P L V K S V V V N K Y T D G S R V L N Y D F N K L T A L A V S Q L T E V F S R K G K H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S S
T T
S S S S
S
T G G G T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence L N K Q D Y D Y K V Q Q A M S N L V L G P A D L D E I L L D G G A S V Y F D Q L K E T V E R I I D Q Y D Q P S V N D L D E V V P N K F Y I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S
T S
S G G G G G T
S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L I K G E L S N H M V E D F D Y D V L P G N F Y E E F C D A V Y K N N K L K E R Y F Y C G T K A V A T R T Y F D Q E Y F Q C F K S I L L I M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T T
S S S S
S
T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence N A N N F K F D M G R L S D D V R I S E R E S N S E A L S K A L S L T N C T T A M L K N L C F Y S Q E S P Q S Y S S T G P D T G R L K F S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T
T T S S
S
G G G S S S S S S S
S
B
S S
B T T
B

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence S Y K E Q V G G N R E L Y I G D L R T K M F T R L I E D Y F E A L S L Q L S G S C L N N E R E F E N A I L S M K L N V S L A H V S Y S M D H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S T T B
S S
S T T T T T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence S K W G P M M C P F L F L A T L Q N L I F L S K D L Q A D I K G R D Y L S T L L T W H M H K M V E I P F N V V S A M M K S F I K A Q L G L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T T
T
S S
S T T
B B
T S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence K K T T Q S I T E D F F Y S N F Q I G V V P S H V S S I L D M G Q G I L H N T S D F Y A L I S E R F I N Y A I S C I C G G T I D A Y T S S D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
B
S S
S S S S S S
B S S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence D Q I S L F D Q V L T E L M Q R D P E E F K T L I E F H Y Y M S D Q L N K F V S P K S V I G R F V A E F K S R F Y V W G D E V P L L T K F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T
T T
S S
S S S
S S S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence A A A L H N I K C K E P H Q L A E T I D T I I D Q S V A N G V P V H L C N L I Q K R T L S L L Q Y A R Y P I D P F L L N C E T D V R D W V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T T B T
T T
S T T
T T
S T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence G N R S Y R I M R Q I E R L I P D A C G R I R S M L R K L Y N K L K T G Q L H E E F T T N Y L S S E H L S S L S N L C E L L G V E P P S E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T T T T S S S S T T
S S
S S T
S S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence D L E F S W L N L A A H H P L R M V S S I A S G F V G L C R T L G S K C V R G P N K E S L Y I K S I Q S L I S D I Q G I E P L I D S H G V Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S
S S S
S T T T T
S S S
S S T T
S S

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence Y W R V P L N I R D G N E G V I S Y F R P L L W D Y M C I S L S T A I E L G A W V L G E P K K V R V L E F F K H N P C D Y F P L K P A A G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S S
S S T T S S
G G G G S
S

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence N H I I H S L R R L Y P S V F E K H I L P F M S D L A S T K M K W S P R I K F L D L C V A L D V N C R E E H Y I V L S S E L R L S H T R T H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S
B
S S
T T T S S S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence T S D A V D N F M R Q I Y F E S Y V R S F V A T T R T L G S F T W F P H K T S V P E G E G L Q R L G P F S S F V E K A I H K G I E R P M F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B T T T T T T B S S S
S
S
S S S S G G G G G G G T G G G T
B
G

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence H D L M P V P L V V H R S G L W E C D K K L A S F T P V V Q D Q D L E M F V K E V G D S S L D L L I G A L S A M I L D R L K L R M Q W S E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
S S S T T
S S S
S T T T
T T S

. . . . . . . . . 1830 . . . . . . . . . 1840 . . .

Sequence D I V S M L K A A M P S N S V K V L N A V L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	D	D	M	A	C	V	K	D	L	V	S	K	Y	L	A	D	N	E	R	L	S	R	Q	K	L	A	F	L	V	Q	T	E	P	R	M	L	L	M	E	G	L	K	L	L	S	L	C	I	E	I	D	S	C	N	A	N	G	C	E	H	N	S	E	D	K	S	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S				G	G	G								S	S			S																									T						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	I	L	H	D	H	G	I	L	T	P	S	L	C	F	V	V	P	D	G	Y	K	L	T	G	N	V	L	I	L	L	E	C	F	V	R	S	S	P	A	N	F	E	Q	K	Y	I	E	D	F	K	K	L	E	Q	L	K	E	D	L	K	S	V	D	I	N	L	I	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S												S						T	T											S		S	T	T	T																			G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	D	G	R	T	S	F	Y	N	E	Q	I	P	D	W	V	N	D	K	L	R	D	T	L	F	S	L	L	R	Y	A	Q	E	S	N	S	L	F	E	E	S	E	Y	S	R	L	C	E	S	L	S	M	T	S	G	R	L	S	G	V	E	S	L	N	V	L	L	D	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S																	T							T	T											T	T	S						S	S		S		G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	S	H	Y	E	E	I	I	A	S	C	H	Q	G	I	N	N	K	L	T	A	H	E	V	K	L	Q	I	E	E	E	Y	Q	V	F	R	N	R	L	R	K	G	E	I	T	G	Q	F	L	K	V	D	K	S	R	L	L	N	D	F	N	N	L	Y	V	D	E	V	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T										S			T	T			T	T																			T	T	S	S																		T	T	S	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	K	D	N	I	E	H	L	I	Y	Q	F	K	R	A	S	P	I	L	R	F	L	Y	A	N	I	G	E	G	I	K	E	C	Q	M	Q	Y	W	R	S	F	L	N	K	V	K	S	L	R	I	L	N	T	R	R	K	L	L	L	I	F	D	A	L	I	L	L	A	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S											T	T	S	S							T	S										T	T	T												T	T		S			T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	D	Q	T	R	H	K	C	S	K	G	W	L	G	S	C	F	I	S	V	N	D	R	L	V	S	L	E	S	T	K	R	D	L	E	K	W	V	G	R	R	Q	Q	S	E	R	S	P	P	D	K	N	Q	I	L	I	S	M	F	Q	K	T	I	L	K	A	T	A	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		S	S	S					S	S	S					S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	D	V	G	I	S	V	E	H	Y	K	I	N	M	E	V	I	C	P	D	S	Y	D	L	I	L	N	F	D	V	S	G	V	V	P	T	I	S	Y	Q	R	T	E	D	E	K	F	P	F	I	M	G	G	V	E	L	L	E	S	T	D	L	E	R	L	S	S	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			T	T	T					T	T	S	S		S								T										B			S				T	T				S		S			S		T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	L	V	N	S	M	K	T	S	S	T	V	K	L	R	Q	N	E	F	G	P	A	R	Y	Q	V	V	R	C	K	E	A	Y	C	Q	E	F	L	L	S	G	A	E	F	Q	L	I	Y	Q	K	T	G	E	C	S	K	C	Y	A	I	N	D	N	R	V	G	E	I	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	S													S	G	G	G	G	S	S	B		S	S									S	S	S	S							S	S		S	S	S									S	S	S	S			B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	Y	A	D	P	K	R	Y	F	P	A	I	F	S	A	E	V	L	Q	T	T	V	S	T	M	I	S	W	V	K	D	C	S	E	L	E	E	Q	L	C	N	I	N	S	L	T	K	M	I	L	V	L	I	L	A	H	P	S	K	R	S	Q	K	L	L	Q	N	L	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T			T	T	T	T		S	T	T												S				G	G	G	S	S	T																		S			G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	I	M	A	Y	V	S	D	Y	H	H	K	D	L	I	D	K	L	R	E	E	L	I	T	D	V	E	F	L	L	Y	R	L	V	R	A	L	V	N	L	I	L	S	E	D	V	K	S	M	M	T	N	R	F	K	F	I	L	N	I	S	Y	M	C	H	F	I	T	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		S				S	S		G	G	G	S						S	S																			T	T			S														T	T	T	T	T	S		S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	P	D	R	L	T	D	Q	I	K	C	F	E	K	F	L	E	P	K	L	E	F	G	H	V	S	I	N	P	A	D	V	A	T	E	E	E	L	D	D	M	V	Y	N	A	K	K	F	L	S	K	E	G	C	T	S	I	K	G	P	D	Y	K	K	P	G	V	S	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S													T					T	T								S	S																	T					S	S	S	S	S					S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	L	S	L	L	T	S	S	F	N	N	G	S	L	F	K	E	S	E	V	K	R	E	I	K	D	P	L	V	K	S	V	V	V	N	K	Y	T	D	G	S	R	V	L	N	Y	D	F	N	K	L	T	A	L	A	V	S	Q	L	T	E	V	F	S	R	K	G	K	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T	T							S	S					T	T										S	S	S	S				S																					T	G	G	G	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	N	K	Q	D	Y	D	Y	K	V	Q	Q	A	M	S	N	L	V	L	G	P	A	D	L	D	E	I	L	L	D	G	G	A	S	V	Y	F	D	Q	L	K	E	T	V	E	R	I	I	D	Q	Y	D	Q	P	S	V	N	D	L	D	E	V	V	P	N	K	F	Y	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	S														S												T	S																								S	G	G	G	G	G	T		S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	I	K	G	E	L	S	N	H	M	V	E	D	F	D	Y	D	V	L	P	G	N	F	Y	E	E	F	C	D	A	V	Y	K	N	N	K	L	K	E	R	Y	F	Y	C	G	T	K	A	V	A	T	R	T	Y	F	D	Q	E	Y	F	Q	C	F	K	S	I	L	L	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		S	T	T			S	S	S	S															S																							T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	N	A	N	N	F	K	F	D	M	G	R	L	S	D	D	V	R	I	S	E	R	E	S	N	S	E	A	L	S	K	A	L	S	L	T	N	C	T	T	A	M	L	K	N	L	C	F	Y	S	Q	E	S	P	Q	S	Y	S	S	T	G	P	D	T	G	R	L	K	F	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S	S									T																	T	T	S	S			S			G	G	G	S	S	S	S	S	S	S			S		B		S	S		B	T	T				B
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	S	Y	K	E	Q	V	G	G	N	R	E	L	Y	I	G	D	L	R	T	K	M	F	T	R	L	I	E	D	Y	F	E	A	L	S	L	Q	L	S	G	S	C	L	N	N	E	R	E	F	E	N	A	I	L	S	M	K	L	N	V	S	L	A	H	V	S	Y	S	M	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S																											T	T	S	T	T	B		S	S		S	T	T												T	T	T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	S	K	W	G	P	M	M	C	P	F	L	F	L	A	T	L	Q	N	L	I	F	L	S	K	D	L	Q	A	D	I	K	G	R	D	Y	L	S	T	L	L	T	W	H	M	H	K	M	V	E	I	P	F	N	V	V	S	A	M	M	K	S	F	I	K	A	Q	L	G	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	T	T												T					S	S			S																	T	T		B	B																				T	S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	K	K	T	T	Q	S	I	T	E	D	F	F	Y	S	N	F	Q	I	G	V	V	P	S	H	V	S	S	I	L	D	M	G	Q	G	I	L	H	N	T	S	D	F	Y	A	L	I	S	E	R	F	I	N	Y	A	I	S	C	I	C	G	G	T	I	D	A	Y	T	S	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S														T	T	S						B			S	S				S	S	S	S																							S	S							B	S	S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	D	Q	I	S	L	F	D	Q	V	L	T	E	L	M	Q	R	D	P	E	E	F	K	T	L	I	E	F	H	Y	Y	M	S	D	Q	L	N	K	F	V	S	P	K	S	V	I	G	R	F	V	A	E	F	K	S	R	F	Y	V	W	G	D	E	V	P	L	L	T	K	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T																			T	T					T	T					S	S				S	S	S					S	S	S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	A	A	A	L	H	N	I	K	C	K	E	P	H	Q	L	A	E	T	I	D	T	I	I	D	Q	S	V	A	N	G	V	P	V	H	L	C	N	L	I	Q	K	R	T	L	S	L	L	Q	Y	A	R	Y	P	I	D	P	F	L	L	N	C	E	T	D	V	R	D	W	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				S	S		T	T															T	B	T																			T	T						S	T	T			T	T			S					T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	G	N	R	S	Y	R	I	M	R	Q	I	E	R	L	I	P	D	A	C	G	R	I	R	S	M	L	R	K	L	Y	N	K	L	K	T	G	Q	L	H	E	E	F	T	T	N	Y	L	S	S	E	H	L	S	S	L	S	N	L	C	E	L	L	G	V	E	P	P	S	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T											S	T	T	T																	T	T	S	S	S	S	T	T						S	S			S	S										T						S	S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	D	L	E	F	S	W	L	N	L	A	A	H	H	P	L	R	M	V	S	S	I	A	S	G	F	V	G	L	C	R	T	L	G	S	K	C	V	R	G	P	N	K	E	S	L	Y	I	K	S	I	Q	S	L	I	S	D	I	Q	G	I	E	P	L	I	D	S	H	G	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T						S		S	S	S								S											T	T	T	T					S	S	S					S										S	T	T							S	S
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	Y	W	R	V	P	L	N	I	R	D	G	N	E	G	V	I	S	Y	F	R	P	L	L	W	D	Y	M	C	I	S	L	S	T	A	I	E	L	G	A	W	V	L	G	E	P	K	K	V	R	V	L	E	F	F	K	H	N	P	C	D	Y	F	P	L	K	P	A	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	S	S	S			S	S	T	T	S																			S		G	G	G	G	S															S
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	N	H	I	I	H	S	L	R	R	L	Y	P	S	V	F	E	K	H	I	L	P	F	M	S	D	L	A	S	T	K	M	K	W	S	P	R	I	K	F	L	D	L	C	V	A	L	D	V	N	C	R	E	E	H	Y	I	V	L	S	S	E	L	R	L	S	H	T	R	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T							T	T	S		B		S	S																										T	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	T	S	D	A	V	D	N	F	M	R	Q	I	Y	F	E	S	Y	V	R	S	F	V	A	T	T	R	T	L	G	S	F	T	W	F	P	H	K	T	S	V	P	E	G	E	G	L	Q	R	L	G	P	F	S	S	F	V	E	K	A	I	H	K	G	I	E	R	P	M	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S					B	T	T	T	T	T	T	B	S	S	S			S		S			S	S	S	S	G	G	G	G	G	G	G							T	G	G	G	T				B			G
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	H	D	L	M	P	V	P	L	V	V	H	R	S	G	L	W	E	C	D	K	K	L	A	S	F	T	P	V	V	Q	D	Q	D	L	E	M	F	V	K	E	V	G	D	S	S	L	D	L	L	I	G	A	L	S	A	M	I	L	D	R	L	K	L	R	M	Q	W	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G										S	S	S				T	T																							S	S	S		S																T	T	T				T	T	S
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.
Sequence	D	I	V	S	M	L	K	A	A	M	P	S	N	S	V	K	V	L	N	A	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								S	T	T	T