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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ogrC_

Fold library idPDB HeaderMoleculeTitle
c7ogrC_3.00PDB header: transcriptionChain: C: PDB Molecule: phikz071,dna-directed rna polymerase;


Added to library: Sat Jul 10 09:03:57 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQLGRREIDLTLLGHTGLDPWYGTTSSARGAMFVTHIGQAPEVNGNESRYFLTGAELEYAKYTHDVRFPE
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Known secondary structure (DSSP)


S




TTT
SSGGGSS
TTTB
TTS


BSS
B

S
STTSS
S


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DCRVLHVLRKYPTGIGKDSIRSNPVTTIIYENYFDKYKTIGVLHVPEYMSHHQDFGYELVKNREVWETIA
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Known secondary structure (DSSP) S

SS

SSSSS

SS


SS
SS


STT
B

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PNEMFSKDTVIAQSGAVKKDGTLGMGVNANVVFLSAAGTIEDGFVANKNFLKRMMPTSYSTAVANAGRKA
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Known secondary structure (DSSP) SS

TT
SB
SSB
SSS
B

B


TT
SSSTS

B
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FFLNMYGDDKIYKPFPDIGDVIRPDGVIFAIRDHDDDLAPAEMTPRALRTLDRTFDRAVIGTPGAKVIDI
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Known secondary structure (DSSP)


S

SS


SS

TT
B

SS


STTSSS

SSSS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DIWRDERVNPSPTPTGMDAQLVKYHTHLSSYYRELLKIYRGLLARRKDDLHITEEFERLIVTAQMFLPQP
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Known secondary structure (DSSP)

TT
SS
SS
TTS
TTSTTT

B
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence DNVRKLSRFYRLDPLDEWRVEVTYKAQKMPAGAFKMTDFHGGKGVICKVMEDEDMPIDENGNRADLIIFG
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Known secondary structure (DSSP) TTS




BSSS
B

S




SS

SSS

STTS
B
SS

B
S
G
 .........430.........440.........450.........460.........470.........480.........490
Sequence GSTMRRSNYGRIYEHGFGAAARDLAQRLRVEAGLDRHAKPTQQQLNSVMGNTQWVDYAFKELLGFYEIIA
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Known secondary structure (DSSP) GGTBTSSS
TTS


TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence PTMHSKMMEHPNPAEHVKTVLMDGFPYIYAPVDDPVDLMAAVNKLINSDKYRPHYGKVSYRDQAGKWVTT
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Known secondary structure (DSSP) SSS
SSTTTSSS



SS



S
SSS



B


SSS

 .........570.........580.........590.........600.........610..
Sequence KDNVLMGPLYMMLLEKIPTAEILDQTNNPLAHAAVIESWLTAEKPSSVPVAV
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Known secondary structure (DSSP) SS
B




TTS
SSSSSSS
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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