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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ogpC_

Fold library idPDB HeaderMoleculeTitle
c7ogpC_3.30PDB header: transcriptionChain: C: PDB Molecule: phikz071,dna-directed rna polymerase;


Added to library: Sat Jul 10 08:41:58 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQLGRREIDLTLLGHTGLDPWYGTTSSARGAMFVTHIGQAPEVNGNESRYFLTGAELEYAKYTHDVRFPE
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Known secondary structure (DSSP)

SS




TTT
SSGGGSS
TTTB
TTS


BSS
B

S
SSTSS
S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DCRVLHVLRKYPTGIGKDSIRSNPVTTIIYENYFDKYKTIGVLHVPEYMSHHQDFGYELVKNREVWETIA
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Known secondary structure (DSSP) SSS


SSSS







SSSS


S

SSS


B

T

 .........150.........160.........170.........180.........190.........200.........210
Sequence PNEMFSKDTVIAQSGAVKKDGTLGMGVNANVVFLSAAGTIEDGFVANKNFLKRMMPTSYSTAVANAGRKA
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Known secondary structure (DSSP) SS
TT
SB
SS

SSS



B


TT
SSSTTS
B
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FFLNMYGDDKIYKPFPDIGDVIRPDGVIFAIRDHDDDLAPAEMTPRALRTLDRTFDRAVIGTPGAKVIDI
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Known secondary structure (DSSP)


BSS
TT

BSS

TT
B

SS
B
S
B

STTSSTTTTTS

SSSSB

B

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DIWRDERVNPSPTPTGMDAQLVKYHTHLSSYYRELLKIYRGLLARRKDDLHITEEFERLIVTAQMFLPQP
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Known secondary structure (DSSP)




SS

S
TTS
STT


B
TTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence DNVRKLSRFYRLDPLDEWRVEVTYKAQKMPAGAFKMTDFHGGKGVICKVMEDEDMPIDENGNRADLIIFG
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Known secondary structure (DSSP) TTS




BSSS
B

S




SS

SSS

STTS
TT

B
S
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence GSTMRRSNYGRIYEHGFGAAARDLAQRLRVEAGLDRHAKPTQQQLNSVMGNTQWVDYAFKELLGFYEIIA
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Known secondary structure (DSSP) TTBTSS

SSS


TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence PTMHSKMMEHPNPAEHVKTVLMDGFPYIYAPVDDPVDLMAAVNKLINSDKYRPHYGKVSYRDQAGKWVTT
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Known secondary structure (DSSP) TTS
SSTT




S




SSSSS






SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence KDNVLMGPLYMMLLEKIGEDWSAAASVKTQPSKLNNADRASTPGRETAIRSFGESETRSYNCTVGPGPTA
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Known secondary structure (DSSP) SS



S

TT

B

S










S


SSSSB







TS
TT
 .........640.........650.........660.........670.........680.........690...
Sequence EILDQTNNPLAHAAVIESWLTAEKPSSVPVAVDREKIPFGGSRPVAMFDHLLECSGIALEYAP
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Known secondary structure (DSSP)
SS
SSS
S
SS
TTTS
S


TTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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