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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ogkA_

Fold library idPDB HeaderMoleculeTitle
c7ogkA_3.40PDB header: rna binding proteinChain: A: PDB Molecule: polyribonucleotide nucleotidyltransferase;


Added to library: Sat Jul 10 08:47:40 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAA
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Known secondary structure (DSSP)



TTSSS
TTSSTT
SS

TT

S


GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence GRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSL
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Known secondary structure (DSSP) T


SSTTSS

S

GGGS
TT

S


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAQLLSEDQMLGAVVFGHE
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Known secondary structure (DSSP) S
S

S




TTS

TTTTTT
SB

SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence QQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIAT
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Known secondary structure (DSSP) TTTSS











TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQA
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Known secondary structure (DSSP) T

S
SSS


TTS

SS



S
SSSSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
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Known secondary structure (DSSP)
GGGS

TT

S

GGGGT





S

TTS

TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGD
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Known secondary structure (DSSP)

S
SS
T


SS

TTSS

SGGGGG
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence MDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKI
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Known secondary structure (DSSP) TT
SS



SS

SS

TTS


 .........570.........580.........590.........600.........610.........620.........630
Sequence NPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVT
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Known secondary structure (DSSP)
TTT
STTT





SSS
SSS




S
 .........640.........650.........660.........670.........680.........690.....
Sequence RIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQ
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Known secondary structure (DSSP) TT

SSSS
GGGSSS
SS
S
SS



S

TTS


SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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