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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ofzA_

Fold library idPDB HeaderMoleculeTitle
c7ofzA_2.62PDB header: peptide binding proteinChain: A: PDB Molecule: abc-type transport system, periplasmic component, involved


Added to library: Sat Oct 30 09:18:30 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLTYCTHASGFSFNPQTADAGTSMNVVTEQIYNKLFDIKNHSATLTPMLAQSYSISADGKEILLNLRHGV
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Known secondary structure (DSSP)


STT

S
TTTS
TTS


TT


S

STT


SS
TTS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KFHQTPWFTPTRDFNAEDVVFSINRVLGHNTYLPRFPYFDSIKLNEKIKSVTALSPYQVKIELFAPDSSI
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Known secondary structure (DSSP)



BTTB

SS


T







TTGGG
-
TT
SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSHLASQYAIIFSQEYAYQLSADDNLAQLDTHPVGTGPYQVKDYVYNQYVRLVRNENYWKKEAKIEHIIV
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Known secondary structure (DSSP) TTSTT




TTT
GGGGGTS



SSTTT
TT
SSS

S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLSTDRSGRLVKFFNNECQIASYPEVSQIGLLKNDDKHYYMQSTDGMNLAYLAFNFDKPLMRDHEIRAAI
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Known secondary structure (DSSP)

S
SSSTTS
SS

TT

SS
SS
S
TTSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SQSLNRARIIHSIYHNTATVANNIIPEVSWASTVNTPEFEFDYHPKIAKNKLADKNLLLNLWVINEEQVY
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Known secondary structure (DSSP) T

TTS
S
SS
TTSTT

S




TTSS
TT

S

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NPAPFKMAEMIKWDLAQAGVKVKVRAVTRPFLTAQENYDLILSGWLAGNLDPDGFMRPILSCGTKNELTN
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Known secondary structure (DSSP)
S
TTT




SS

SGGGT
STTTTSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LSNWCNEEFDQFMDRAITTSHLSSRAKAYNEAQELVLRELPIIPIANVKRILVANSRVKGVKMTPFGSLD
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Known secondary structure (DSSP) TT



TTT

S
S
TT



BTTBS

 .......
Sequence FSTLYFI
Predicted secondary structure

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Known secondary structure (DSSP) GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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