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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7obnA_

Fold library idPDB HeaderMoleculeTitle
c7obnA_2.45PDB header: dna binding proteinChain: A: PDB Molecule: dna ligase;


Added to library: Sat Feb 12 08:37:44 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TIPTGFKPMLAATLTKPELIKFPVWASPKIDGIRCVFFGGVAYSRSLKPIPNPVVQEFAAAYASLLEGLD
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Known secondary structure (DSSP)



S



B



GGG

SS

STT
TTS




TTTTTTTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GELTVGSPTDANCMQNSMAVMSKDFTFHVFDWFPLRDEMGYDRRSEIVERRIADFYARDIKAVPQHLCVC
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Known secondary structure (DSSP)
SSTTT
TTGGGTTSSS














S


T

-




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AEDLDTLEARFLADGYEGMMIRAHSGTYKCGRSTEREGGLVKVKRFVDGEAVIVGFEEEMRNENEATRNA
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Known secondary structure (DSSP) TTTT
STT



SSB

TTTTS



S

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGRTERSTAQAGLVGKETLGALVVRRFEEPYGPVGPEFNIGTGFTAAQRRDYWQGRDGLIGRVVKFKHFD
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Known secondary structure (DSSP) TS



SSS





SS

TGGGGTT
SS
 .........290.........
Sequence HGTVDAPRHPVFIGFRHPE
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Known secondary structure (DSSP) SS

SS
SS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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