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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ob9M_

Fold library idPDB HeaderMoleculeTitle
c7ob9M_2.70PDB header: transcriptionChain: M: PDB Molecule: dna-directed rna polymerase i subunit rpa49;


Added to library: Sat Dec 11 08:39:24 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VLPSARWQYCGAPDGSQRAVLVQFSNGKLQSPGNMRFTLYENKDSTNPRKRNQRILAAETDRLSYVGNNF
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Known secondary structure (DSSP)






S
S
TTTSTT


SS

S

S

SSTTTSS

SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQPLFSDVSVESELALESQTKTYREKMDSCIEAFGT
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Known secondary structure (DSSP) STT

TTTTSS


TTT






TTTT


SSTT
SSSGGGGGGSSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TKQKRALNTRRMNRVGNESLNRAVAKAAETIIDTKGVTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVY
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Known secondary structure (DSSP)
TTGGGG



SSSS
GGGTTSS



SS

SS


TT

SSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFEDLLSPAEYEALQSPSEMIEENSHCTFVIEALKSLPSDVESRDRQARCIWFLDTLIKFRAHRVVKRKS
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Known secondary structure (DSSP)
SS



GGG







S
SSTTT
SSS


TTTTTS
S



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALGPGVPHIINTKLLKHFTCLTYNNGRLRNLISDSMKAKITAYVIILALHIHDFQIDLTVLQRDLKLSEK
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Known secondary structure (DSSP) S
TT


S
TT

TTTB

TT

 .........360.........370.........380........
Sequence RMMEIAKAMRLKISKRRVSVAAGSEEDHKLGTLSLPLP
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Known secondary structure (DSSP) S
TT






SS
SSS





B






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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