Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o756_

Fold library idPDB HeaderMoleculeTitle
c7o756_3.20PDB header: transcriptionChain: 6: PDB Molecule: general transcription and dna repair factor iih subunit


Added to library: Sat Jun 19 08:30:53 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGYAWEDEIKRSWDLVKVASLVASIVEARKKRTAKKNITPYQRGIIRSLILTLDCSEAMLEKDLRPNRHA
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)










TT





B

S
SGGGG
SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQLVSQVSGNPQDHIDALKSIRKQEPKGNPSLQNALEMA
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TT
TTS
TTS


S


 .........150.........160.........170.........180.........190.........200.........210
Sequence RGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSAQVAICKELCKATNYGDESF
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTTS
TTS

S



SS
T
SSS

TTTT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YKILLDETHLKELFNEAVTPLPVNKINKGFTLVKMGFPTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVC
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
SSTTS

B

TT












SS

TTT

S


TTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLPTVCPCCDLMLILSTHLARSYHHLMPLKTFAEVPTTEKFRSEDCFSCQSRFPILLTSSRYRCEDCKQE
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) SSS
TTT



TTS






TTS

S
SS
TTT












TTT

 .........360.........370....
Sequence FCVDCDVFIHEILHNCPGCESKPV
Predicted secondary structure















SS confidence























Known secondary structure (DSSP)
T

S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D