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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o751_

Fold library idPDB HeaderMoleculeTitle
c7o751_3.20PDB header: transcriptionChain: 1: PDB Molecule: general transcription and dna repair factor iih subunit


Added to library: Sat Jun 19 08:29:08 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSHSGAAIFEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVKPQR
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Known secondary structure (DSSP)

STT
SSSS
SSSS
GGG

TTSS






 .........80.........90.........100.........110.........120.........130.........140
Sequence HMFSFNNRTVMDNIKMTLQQIISRYKDADIYEEKRDSLSKEKLLTNLKLQQSLLKGNKVLMKVFQETVIN
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Known secondary structure (DSSP) S


TTS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGLPPSEFWSTRIPLLRAFALSTSQKVGPYNVLSTIKPVNKVNVNLSREKILNIFENYPIVKKAYTDNVP
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Known secondary structure (DSSP) T


TTTTS







TTT












TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNFKEPEFWARFFSSKLFRKLRGEKIMQNDRGDVIIDRYLTLDQEFDRKDDDMLLHPVKKIIDLDGNIQD
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Known secondary structure (DSSP) TTS
ST



TT



TT




GGG
TS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DPVVRGNRPDFTMQPGVDINGNSDGTVDILKGMNRLSEKMIMALKNEYNDERNELKIDDLNESYKTNYAI
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Known secondary structure (DSSP) STT






GGGS

B
TTSSB
SSS


TS
STTS








 .........360.........370.........380.........390.........400.........410.........420
Sequence IHLKRNAHEKTTLKVSNQQMLQQLSLVMDNLINKLDLNQVVPNNEVSNKINKRVITAIKINAKQAKHNLE
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SGGGS

SSSTT


 .........430.........440.........450.........460.........470.........480.........490
Sequence VKSTLPIDLLESCRMLHTTCCEFLKHFYIHFQSGEQKQASTVKKLYNHLKDCIEKLNELFQDVLNGDGES
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Known secondary structure (DSSP)


SS
TT

GGGTTT
 .........500.........510.........520..
Sequence MSNTCTAYLKPVLNSITLATHKYDEYFNEYNN
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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