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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7o6bA_

Fold library idPDB HeaderMoleculeTitle
c7o6bA_3.88PDB header: chaperoneChain: A: PDB Molecule: transcription elongation factor spt6;


Added to library: Tue Jun 21 20:03:51 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDIPERYQELRAGITDYGNMSSEDQELERNWIAEKISVDKNFDANYDLTEFKEAIGNAIKFITKENLEVP
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Known secondary structure (DSSP)

S
TTS
SSTT


T

S
TTTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence FIYAYRRNYISSREKDGFLLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDPIVTEYFKNQSLQD
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Known secondary structure (DSSP) SGGGGB
SSTTS
B

T




 .........150.........160.........170.........180.........190.........200.........210
Sequence IYDYLEFKYANEINEMYEKFKASPLYQAVSDIGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNA
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Known secondary structure (DSSP) TTTTTT


TTTTTSTTTTSS
TS
SS





S

 .........220.........230.........240.........250.........260.........270.........280
Sequence NSGDLQKLAIDTVQKYYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDNRTPMHFRR
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Known secondary structure (DSSP) TTTT




B


TTTTTTSTT
SGGG



TTGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALETTNTSDIAIEWNNFRKLAFNQAMDKIFQDIS
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Known secondary structure (DSSP)
TTS

B
TT




S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRDPKIPKILSLTCGQGRFGADAIIAVYVNRKGDF
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Known secondary structure (DSSP)





S
SSS





TTS
TTSS

TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence IRDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSRGHTIPI
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Known secondary structure (DSSP)
S
TT
SS


S

SSTT
B
TTSSB

 .........500.........510.........520.........530.........540.........550.........560
Sequence IYVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTSEEVRSLSIHPHQNLLSSEQL
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Known secondary structure (DSSP)


SSTTS

S
TS
SSTTGGGS
 .........570.........580.........590.........600.........610.........620.........630
Sequence SWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLNEPLLARQQLITHNILH
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Known secondary structure (DSSP) S
TT
GGGGGSTT

TS


STTTTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence KTIFMNSAGFLYISWNEDLEHDQLDSTRIHPEDYHLATKVAADALEYDPDTIAEKEEQGTMSEFIELLRE
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Known secondary structure (DSSP) TTT





TT

GGGGS


GGGTT

T

 .........710.........720.........730.........740.........750.........760.........770
Sequence DPDRRAKLESLNLESYAEELEKNTGLRKLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTF
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Known secondary structure (DSSP)
S
TTS




TTSSS


S






T


TTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence FKGSIIPVRVERFWHNDIICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEV
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Known secondary structure (DSSP)
SS
SSS
TT


SGGGTTTTSSS
GGGT

SSS
TTTT
 .........850.........860.........870.........
Sequence SLLDHDVKYVPISYSKDPSIWDLKQELEDAEEERKLMMA
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Known secondary structure (DSSP)
S









TTTS
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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