PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7o4mA_

Fold library id	PDB Header	Molecule	Title
c7o4mA_	1.30	PDB header: rna binding protein	Chain: A: PDB Molecule: trna (adenine(22)-n(1))-methyltransferase;

Links to external resources
Added to library: Wed Jun 22 19:54:52 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G M I S L N N R L T T V S R F L K Q G T I A D I G S D H A Y L P I Y A I Q N H L C E C G I A G E V I Q G P F Q A A V K N V A A N Q L V D R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T
S T T T T S
S S S T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D V R L G D G L S V I Q P E D V I D N I T I C G M G G P L I A K I L K D G Q D K L S Q H P R L I L Q S N I Q T E N L R Q T L Q Q L N Y E I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G G
T T
S
T G G G
T T
S S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D E I I M E E K G H I Y E I V V A E Y S T E L I E L S S D E L K F G P K L L N N K N E Y F I K K W Q R E L E A L Y H I K S K L N T E Q H H Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T G G G T
T T S
T T T

. . . . . . . . . 220 . . . . . .

Sequence R L A Q I N D E I A V I E R V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	M	I	S	L	N	N	R	L	T	T	V	S	R	F	L	K	Q	G	T	I	A	D	I	G	S	D	H	A	Y	L	P	I	Y	A	I	Q	N	H	L	C	E	C	G	I	A	G	E	V	I	Q	G	P	F	Q	A	A	V	K	N	V	A	A	N	Q	L	V	D	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T			S	S						T		S	T	T									T	T	S		S							S	S														T	T		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	V	R	L	G	D	G	L	S	V	I	Q	P	E	D	V	I	D	N	I	T	I	C	G	M	G	G	P	L	I	A	K	I	L	K	D	G	Q	D	K	L	S	Q	H	P	R	L	I	L	Q	S	N	I	Q	T	E	N	L	R	Q	T	L	Q	Q	L	N	Y	E	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G	G			T	T				S																			T	G	G	G		T	T									S	S		T										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	E	I	I	M	E	E	K	G	H	I	Y	E	I	V	V	A	E	Y	S	T	E	L	I	E	L	S	S	D	E	L	K	F	G	P	K	L	L	N	N	K	N	E	Y	F	I	K	K	W	Q	R	E	L	E	A	L	Y	H	I	K	S	K	L	N	T	E	Q	H	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T												S	S													T	T	G	G	G	T																					T	T	S		T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	R	L	A	Q	I	N	D	E	I	A	V	I	E	R	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)