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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o4kW_

Fold library idPDB HeaderMoleculeTitle
c7o4kW_3.60PDB header: transcriptionChain: W: PDB Molecule: transcription initiation factor iie subunit alpha;


Added to library: Sat Jun 19 08:23:32 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRPIDDIVKNLLKFVVRGFYGGSFVLVLDAILFHSVLAEDDLKQLLSINKTELGPLIARLRSDRLISIHK
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Known secondary structure (DSSP)

S
SSSST

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QREYPPNSKSVERVYYYVKYPHAIDAIKWKVHQVVQRLKDDLDKNSEPNGYMCPICLTKYTQLEAVQLLN
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Known secondary structure (DSSP)

SSS



S



B
TTT

B

TTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence FDRTEFLCSLCDEPLVEDDSGKKNKEKQDKLNRLMDQIQPIIDSLKKIDDSRIEENTFEIALARLIPPQN
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Known secondary structure (DSSP) SS
SSBB
TTT

B
B

S
SSTTTTS





GGG


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSHAAYTYNPKKGSTMFRPGDSAPATLHINITTASDEVAQRELQERQAEEKRKQNAVPEWHKQSTIGKTA
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Known secondary structure (DSSP) S
SS






TT




TT












T


S


SS

 .........290.........300.........310..
Sequence LGREERENEKTLNDYYAALAKKQALEDEFEDV
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Known secondary structure (DSSP) S












Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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