Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o4k0_

Fold library idPDB HeaderMoleculeTitle
c7o4k0_3.60PDB header: transcriptionChain: 0: PDB Molecule: general transcription and dna repair factor iih helicase


Added to library: Sat Jun 19 08:32:07 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQMHYPEHRKII
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

SS

SSS
B

S

TTS

STT


 .........80.........90.........100.........110.........120.........130.........140
Sequence YCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEVSKERKGTVVDEKCRRMTNGQ
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) SSSS

S



GGGS


TTTTT
S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEKLLKYCEEKTLCPYFIVRRMISLCNIIIYSY
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)
TTS




TTS
GGGSS
S
T

TSTTT
ST
 .........220.........230.........240.........250.........260.........270.........280
Sequence HYLLDPKIAERVSNEVSKDSIVIFDEAHNIDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQ
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
TTS
SS
S
TTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence KLQDEYEKLVQGLHSADILTDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLH
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) T

S
SSS

SS


S
TTTS

S


GGGSSGGG
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VISETPKSFLQHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP)

S


TTT
S

STTTT

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKK
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) S
SSSS
SS




TTSSS
S

TT

STTTT






SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGIL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

B
TTS
B



GGGTT

SSS
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence DEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLSVARGKVSEGIDFDHQYGRTVLMIGIPFQYT
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTS

SSTTS
TTSSTTTT



GGG
SS




S
 .........640.........650.........660.........670.........680.........690.........700
Sequence ESRILKARLEFMRENYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQG
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) S



TTS
SSTT


GGGGGGGGGS
TT
 .........710.........720.........730.........740.........750..
Sequence LSDADLNLSTDMAISNTKQFLRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRK
Predicted secondary structure



























SS confidence



















































Known secondary structure (DSSP) S
GGGSSB
TS


GGGGTTTTSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D