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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o4i7_

Fold library idPDB HeaderMoleculeTitle
c7o4i7_3.20PDB header: transcriptionChain: 7: PDB Molecule: general transcription and dna repair factor iih helicase


Added to library: Sat Jun 19 09:57:23 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PADFVPDSVSGMFRSHDFSYLRLRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHI
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Known secondary structure (DSSP)

S



TTGGGSSS


TTS


TTTTT


TTT
TTSTTS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HEYKITAYSLYAAVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVETTQAD
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Known secondary structure (DSSP)

TT

BSS


TS
SS
TTS
ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILQMLLNDSVIGVHSFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRNPDLDIDLKPSTQIRPYQEKSL
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Known secondary structure (DSSP) TTTSSS



STTSS


B

B
TTT

SS





B
TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence SKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLCTSSVSVMQWRQQFLQWCTLQPENCAVFTS
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Known secondary structure (DSSP) SSSSB




TTS

S

S
B


GGG
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DNKEMFQTESGLVVSTYSMVANTRNRSHDSQKVMDFLTGREWGFIILDEVHVVPAAMFRRVVSTIAAHAK
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Known secondary structure (DSSP) S





SSS



S


S
BSTGGGTTSTTTS
BS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LGLTATLVREDDKIGDLNFLIGPKLYEANWMELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLL
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Known secondary structure (DSSP)
S



SSGGGGGT




STSS




S
 .........430.........440.........450.........460.........470.........480.........490
Sequence YIMNPTKFQACQFLIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQIN
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Known secondary structure (DSSP) S
TT

S
T

B

TTS

SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence TIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYST
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Known secondary structure (DSSP)

GGGSSS


SS



TT
GGGGG
TTSSSTT

SSS
 .........570.........580.........590.........600.........610.....
Sequence KRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQEVLLKNHPLIRKMY
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Known secondary structure (DSSP) TTT


S

TT
TTSS

TT
S

TGGGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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