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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7o3dA_

Fold library idPDB HeaderMoleculeTitle
c7o3dA_3.71PDB header: chaperoneChain: A: PDB Molecule: transcription elongation factor spt6;


Added to library: Tue Jun 21 20:35:07 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDIPERYQELRAGITDYGNMSSEDQELERNWIAEKISVDKNFDANYDLTEFKEAIGNAIKFITKENLEVP
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Known secondary structure (DSSP)

S
TTS
SSTT


T

S
S
TS


 .........80.........90.........100.........110.........120.........130.........140
Sequence FIYAYRRNYISSREKDGFLLTEDDLWDIVSLDIEFHSLVNKKDYVQRDVVLTAKGKKEIQKGSLYEDNRT
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Known secondary structure (DSSP) SGGGGB
SSTTS
B

TT


TTTTSSSTTTSGGG



 .........150.........160.........170.........180.........190.........200.........210
Sequence PMHFRRDPDVFLKMVEAESLNLLSVKLHMSSQAKIFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQA
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Known secondary structure (DSSP) TT
TTS



TT





 .........220.........230.........240.........250.........260.........270.........280
Sequence PFIPNVRDPKIPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPFDKTNPEKFEDTLDNIIQSC
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Known secondary structure (DSSP)


S
SSS






SS
TTSS

TTS

S
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QPNAIGINGPNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQNSERAAQEFPNKPPLVKY
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Known secondary structure (DSSP)

S

SSTT
B
TTSSB






SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence CIALARYMHSPLLEYANLTSEEVRSLSIHPHQNLLSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYAS
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Known secondary structure (DSSP)
S
S


TTGGGS
S

BTT
G
 .........430.........440.........450.........460.........470.........480.........490
Sequence ALKYISGFGKRKAIDFLQSLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEDLEHDQLDSTRIH
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Known secondary structure (DSSP) GGGGSTT


S


STTTTSS
TTT
B





TT

GGGGTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence PEDYHLATKVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEELEKNTGLRKLN
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Known secondary structure (DSSP) GGGT

T
TSS
TTS




 .........570.........580.........590.........600.........610.........620.........630
Sequence NLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRVERFWHNDIICTTNSEVECVV
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Known secondary structure (DSSP) STT


S






T


TTTS
TT



B
SS



TT


 .........640.........650.........660.........670.........680.........690.........700
Sequence NAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEVSLLDHDVKYVPISYSKDPSIWDLKQELEDA
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Known secondary structure (DSSP)
GGGTT
GGG
S
STTT

TTSTTTT
S


S





TTTS
 .........
Sequence EEERKLMMA
Predicted secondary structure

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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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