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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7o0gA_

Fold library idPDB HeaderMoleculeTitle
c7o0gA_3.10PDB header: viral proteinChain: A: PDB Molecule: pr125pol;


Added to library: Sat Jul 3 09:02:19 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPLLQLPVEVKKTELNGFWDTGAQITCIPEAFLKEEIPIGEAQIKTLHTKLQSVYYLKFKVLGRKVEAEV
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Known secondary structure (DSSP)



TT
SS
SSGGGSTTS











TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTSPFDYVIISPSDIPWYKPQPLELTVKLPVQDFKKELINKANINNEEKKQLAKLLDKYDVLWQQWENQV
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Known secondary structure (DSSP) SSSS
TTT
TT







S
B

SS
S
TTTTB

BTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence GHRKIPPHNIATGTVAPRPQRQYHINTKAKPSIQQVIDDLLKQGVLIKQTSVMNTPIYPVPKPDWRMVLD
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Known secondary structure (DSSP)



S

B




SS










TTTTS


S

B






 .........220.........230.........240.........250.........260.........270.........280
Sequence YRAVNKTVPLIGAQNQHSLGILTNLVRQKYKSTIDLSNGFWAHPITKDSQWITAFTWEGKQHVWTRLPQG
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Known secondary structure (DSSP)
TTS


SS



SS


SBTTSGGGSBB
GGGGGGG
TTSB

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FLNSPALFTADVVDLLKNIPGISVYVDDIYFSTETVSEHLKILEKVFKILLEAGYIVSLKKSALLRYEVT
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Known secondary structure (DSSP)
SSTTSSSSTTS
T

B
GGG
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FLGFSITQTGRGLTSEFKDKIQNITSPRTLKELQSILGLFNFARNFVPNFSEIIKPLYSLISTAEGNNIK
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Known secondary structure (DSSP) TT
SS

T




SGGGTTTSTT
BTTB

 .........430.........440.........450.........460.........470.........480.........490
Sequence WTSEHTRYLEEIVSALNHAGNLEQRDNESPLVVKLNASPKTGYIRYYNKGGQKPIAYASHVFTNTELKFT
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Known secondary structure (DSSP)

T


B



SSS

SSTT
SS
S

TS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PLEKLLVTMHKALIKAIDLALGQPIEVYSPIISMQKLQKTPLPERKALSTRWITWLSYLEDPRITFYYDK
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Known secondary structure (DSSP) SS

S


ST

STT

S
T
SS

T
 .........570.........580.........590.........600.........610.........620.........630
Sequence TLPDLKNVPETVTDKKPKMLPIIEYAAVFYTNGSAIRSPNKSHSSGMGIVHAVFELTIEHQWSIPLGDHT
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Known secondary structure (DSSP) TS


SS






S





TTTSS

B




B



S

 .........640.........650.........660.........670.........680.........690.........700
Sequence AQYAEISAVEFACKKANNISGPVLIVTNSDYVARSVNEELPFWRSNGFVNNKKKPLKHISKWKNISDSLL
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Known secondary structure (DSSP) S
S

S
TTSB
TTS
B
TT
 .........710.........720.........730...
Sequence LKRDIIIVHEPTSIHTQGNNLADKLATQGSYTV
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Known secondary structure (DSSP)
TT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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