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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7nxrA_

Fold library idPDB HeaderMoleculeTitle
c7nxrA_1.90PDB header: viral proteinChain: A: PDB Molecule: capsid vertex component 2;


Added to library: Sat Oct 16 13:23:38 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVYTVTVYPGDPAFEIQDSLPQKIWPMLYLHQQRWLPSYGPWHIRFTSSAMQLRNFPRSLRGQANFQNSM
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Known secondary structure (DSSP)



STTS

SS
GGGGGS
TTT

TT
TT

GGG

GGGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLKLITALTDVISRISLDFYSDLRHLSDTMSALCLIAAYYSEKNQTPLPTNLPELLGNITAKVTLLVRDL
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Known secondary structure (DSSP)
TTTS
SS

TT


T




STSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KRAAANKGFNFNRNSSSLLPAQGGLYSNDFFQEHALYSLFRTAGMLASSSSPEYPRADSVLAITAAVFGD
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Known secondary structure (DSSP) TTT
BS



SSS
SS

TTS


TTTTTTBTT
S

TT
SS




T
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence NIPPFAAYQWNLRSGLKALESLILLFLLLDSNKRLHLEALLGESYSVFSFLMENYLVPTLLHRPTTNMSA
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Known secondary structure (DSSP) TS

TTTSTT



S


TT

T
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence LFPGLYLLQLEFSSGASTPHAIHLTDVKFRDIFNILVQSNVSQELIRAKQSLRVSCETGSGNLLESLSPG
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Known secondary structure (DSSP)
TTTS

ST




SS
 .........360.........370.........380.....
Sequence TTMRDIIRKEFMAQDVYDYVYFCVLGALPVTVAVV
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Known secondary structure (DSSP)


SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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