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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7nxqJ_

Fold library idPDB HeaderMoleculeTitle
c7nxqJ_2.42PDB header: viral proteinChain: J: PDB Molecule: capsid vertex component 2;


Added to library: Sat Oct 16 08:36:24 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RNFTVAIVPGDPHFSVDRDLRGELMPTLYMNQNQWLPSFGPWFISLTDNAMQRRVFPKELKGTVNFQNST
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Known secondary structure (DSSP)



STTS

SS
GGGGGS
TTT


SS

GGG

GGGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLKLISHTLTTVASTTADFFADARHLTDTQAALCLVNAYFCQKTSRQLPATPDDLLADLPQKLDLLITQL
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Known secondary structure (DSSP)
TTT


S

TT


SS




STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KQESGPGDFSFTYSNPQERASLAPLNKESRYPTAFFQRHKLHAMMAKAGLFPHNPAMDLVFAITSAMFGS
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Known secondary structure (DSSP) T

SS
BS



SST
SS
GGG
SS

TTTTTTBTT
S






S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIPPFSAYQWNLRAGIVALEVFILAYGLLEFGQVARGHPNRRLNLVSLLGPKFQPMLKRGQLFSFISEHY
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Known secondary structure (DSSP) TS

TTTSTTT


SS

TT



GGG





TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IIPTLQANPNAPVSFIFPGIILAALEARSTPGPFVNLTGSRFNEIFEILNQQLTFRDPLALLQARTALRL
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Known secondary structure (DSSP)
TT












GGGTT

 .........360.........370.........380.........390.........400..
Sequence ATEEGLDVLLSHPSPPTLLQEIIKSQFGGGDDYDRAYFMVLGCLPVVLAVVP
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Known secondary structure (DSSP) SSS


SSS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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