Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7nxdB_

Fold library idPDB HeaderMoleculeTitle
c7nxdB_4.60PDB header: cell adhesionChain: B: PDB Molecule: integrin beta-1;


Added to library: Sat Aug 28 09:21:11 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKKN
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)


T
SS
SS
SS
SSS
SSS
GGGTT


SSSB





S

 .........80.........90.........100.........110.........120.........130.........140
Sequence KNVTNRSKGTAEKLKPEDIHQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENV
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)



STT
SSSTT

TTT

SSS
S


TT





S




GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTTPFSYKNVLSLTNKGEVF
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
S





TTTS

S
SS
SSS





SS


BS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCH
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)





SSSSB

TTTT

SSSS
B

SS
GGGTT









 .........290.........300.........310.........320.........330.........340.........350
Sequence LENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLII
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SSSB


TTTS



TT
TTTSSS

TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DAYNSLSSEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

B




TT

TTS


BT



TT

S


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDM
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) B
TT
S







S
SS
TTTTTTT

TT


TT

SSS



SS
SS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence DAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECN
Predicted secondary structure



























































SS confidence





































































Known secondary structure (DSSP)
TTT
SSSSS
GGGGSTT


SSS
SS
SSSS



SS
S
BSSSSBGGGT
TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence PNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAEHKECVQCRAF
Predicted secondary structure



























































SS confidence





































































Known secondary structure (DSSP) TTB
SSSS

BS

TTT

SSSSTTSSS
TT

STT
BSSS

B
SSS



TTTTTSSS
 .........640.........650.........660.........670.........680.........690
Sequence NKGEKCTQECSYFNITKVESRDKLVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPEC
Predicted secondary structure












































SS confidence



























































Known secondary structure (DSSP)

S


TTT



B


SS
S






TT


B


SSS


B


SS
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D