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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7nsnB_

Fold library idPDB HeaderMoleculeTitle
c7nsnB_2.29PDB header: hydrolaseChain: B: PDB Molecule: gh92 alpha-1,2-mannosidase;


Added to library: Sat Sep 24 13:53:15 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKTDFFSSFEKSDLQLTWTNTVETDANGKKMSSGIDGNVAPPPGDMKSLIGKGPTSSYTAKTNVGWTGLG
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Known secondary structure (DSSP)





TTS


S
SS
B
B
TTS
BSS












S

SSS
TTS
SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALNYSGTHLSDGRAYSYNKLYDVDILVTPATELSYFIAPEFTDKNHNDYSSTYVSVDLAFSDGTYLHDLK
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Known secondary structure (DSSP)

SS


TT


STTS


GGGSTTS
BGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVDQYGVGLNPKDQGDSKYLYVNQWNTIKSTIGSVAAGKTIKRILVAYDNPKGPGAFRGSIDDIKIDGKP
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Known secondary structure (DSSP)
B
TTS
BSST
S
TTS
TTT
SS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VQKAFGSPIDYVNILRGTQSNGSFSRGNNFPAVAIPHGFNFWTPTTNAGSSWIYQYHESNSVNNLPQIQA
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Known secondary structure (DSSP)




SSGGGG

TTTT
S

SSS
S





B

TT
S
S
TTSSS


SSTT

TTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence FSVSHEPSPWMGDRQTFQVMPSASTAATPNANRDSRALEFNHANEIAQPHYYSVKFENGIRTEMTPTDHA
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Known secondary structure (DSSP)

S
TTT

BS



SSS




TTTTS

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AMFKFTFTGATSNLIFDNVNNNGGLTIDAKSGEITGYSDVKSGLSTGATRLFVYAAFDKPVIKSGKLTGE
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Known secondary structure (DSSP)

SS
SSSSTTTT

B
TT
TT


SS


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SRNNVTGYVRFDTSKDEDKVVTMKIATSLISVEQAKKNLEQEIGLNDTFEGLKEKAKTEWNKKLGIIEVE
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Known secondary structure (DSSP) S
TTT


SGGGSSSBS
SS

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence GASEDQLVTLYSNLYRLFLYPNSAFENVGTTTDPVYKYASPYSAATGQDTATTTGAKIVDGKTYVNNGFW
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Known secondary structure (DSSP) S


S


S
SSS


SSS

SS


SSB

S
S


 .........570.........580.........590.........600.........610.........620.........630
Sequence DTYRTAWPAYSLLTPTFAGELIDGFVQQYRDGGWIARWSSPGFANLMPGTSSDVAFADAYLKGVTNFDVQ
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Known secondary structure (DSSP) TTT
SS

SSSS

SS

TTT


S
 .........640.........650.........660.........670.........680.........690.........700
Sequence SFYQSAIRNAEAVSPNAGTGRKGLTTSIFDGYTNTSTGEGLAWAMDGYINDFGIANLAKALKEKGDKSDP
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Known secondary structure (DSSP) B

SSTTSS
TTSS

TTSTTT
TTST
 .........710.........720.........730.........740.........750.........760.........770
Sequence YYANYAADYQYFLNRAQNYVHMFNPSIEFFNGRTANGAWRSTPDNFNPAVWGSDYTETNGWNMAFHVPQD
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Known secondary structure (DSSP) TGGGTTGGGGGTTTT

B
TTS
BS

TTT

TT
TTGGGGTT

TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence GQGLANLYGGKEGLATKLDQFFSTSETGLFPGSYGGTIHEMREARDVRMGMYGHSNQPSHHIAYMYDYAG
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Known secondary structure (DSSP) TTSTTS


S


GGG
S


STT

TTSGGGTTGGGGT
 .........850.........860.........870.........880.........890.........900.........910
Sequence QPWKTQEKVREALNRLYIGSAIGQGYSGDEDNGEMSAWYILSAMGFYPLKMGTPEYAIGAPLFKKATIHL
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Known secondary structure (DSSP)
SS

GGGT


SS

TTTT

STTSS


SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence ENGKSIVINAPNNSKENKYVQSMKVNGKAYAKTSILHADIANGAVIDFEMGSKPSKWGSGDQDILQSITP
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Known secondary structure (DSSP) TTS

TT

SS

TT


STT
SS


TT
STTTS


SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GSTDGTSLSPLPLRDVTDRLIAAEKGAVTVSDEGNGQLLFDNTSNTQLSMKSKTPSIVYQFKEGKQNVKM
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Known secondary structure (DSSP) GGGTT
S




STTTTTSTT


GGGGSSS
TT

SSSS
TTS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence YTLTSSKASQNEDPKSWVLKGSNDGKSWSVLDQRKNETFQWRQYTRAFTIQHPGKYSQYKLEITENAGAE
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Known secondary structure (DSSP)

SS
GGGSSSSSS
S



SSSBSSSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence VTTLAELELLGYDDVTNSYQAVYELMEQFKQSKDLTGPMAVQLNNSLTTSLDHFKKDHKDQAIKHLEDFL
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Known secondary structure (DSSP) SS

TTSB
TT
 .........1200.........1210.........1220....
Sequence KHLNNKGLQDRISSKAKGVLSADANQLIVLLARD
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Known secondary structure (DSSP) T
GGGGGGB
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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