Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7nkyQ_

Fold library idPDB HeaderMoleculeTitle
c7nkyQ_3.20PDB header: transcriptionChain: Q: PDB Molecule: fact complex subunit spt16;


Added to library: Sat Jul 10 08:39:14 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ESYVRDSQLPTNIRDLRIHVDWKSQTIILPIYGRPVPFHINSYKNGSKNEEGEYTYLRLNFNSPGSSGGI
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)



SSSS

S
SS

S

TTTTSSSSSTTTTS
TTTTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SKKVEELPYEESADNQFVRSITLRSKDGDRMSETFKQIADLKKEADVVQQDKLIENKTGRTKRLDQIFVR
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TT


TT
SSS





TTSTTTT














SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence PNPDTKRVPSTVFIHENGIRFQSPLRTDSRIDILFSNIKNLIFQSCKGELIVVIHIHLKNPILMGKKKIQ
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) S
SSSS


SS
TTTS

TTT
STT
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVQFYREASDMSVDDELEQEQEERRKRAALDKEFKYFADAIAEASNGLLTVENTFRDLGFQGVPNRSAVF
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)








TTSS

B


TTT

SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence CMPTTDCLVQLIEPPFLVINLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWL
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) B

SS

B
TTSSS

B

GGGS
STT
SS
S

SS






STT
 .........360.........370.........380.........390.........400....
Sequence TDMDIPYTVSTINLNWATIMKSLQDDPYQFFLDGGWNFLATGSDDEASDESEEE
Predicted secondary structure




























SS confidence





















































Known secondary structure (DSSP) T







S
TTTTGGGGGS
S






S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D