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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7n88A_

Fold library idPDB HeaderMoleculeTitle
c7n88A_3.70PDB header: membrane protein/transport proteinChain: A: PDB Molecule: lactoferrin-binding protein b;


Added to library: Sat Dec 4 08:59:26 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VNRPAVGAAMRLLRRNTAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKGNKLQQLKSEIHKRDSDVE
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Known secondary structure (DSSP)




S







S
SSSSS
SSS

S






SS





S

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence IRTSEKENKKYGYEFVDAGYVYTKNGKDEIEQNSGGKRFTHRFGYDGFVYYSGERPSQSLPSAGTVKYFG
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Known secondary structure (DSSP)
B
SGGGT
SS






TTS

S


SB
SS


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NWQYMTDAKRHRTGKAVASDDLGYITFYGNDIGATSYAAKDADDREKHPAEYTVDFDKKILKGELIKNQY
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Known secondary structure (DSSP)


S
SSSS


TTTSSBSTTTTTSS

BSTTB

SBTTB

TTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence VQKKNDPKKPLTIYNITADLNGNRFTGSAKVNTEVKTRHADKEYLFFHTDADQRLEGGFFGDNGEELAGR
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Known secondary structure (DSSP)
SSTTS



TT
S
TTTTTTTS
S
BTT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FISNDNGVFGVFAGKQKTNASGTNPAMPFGKHTKILDSLKISVDFEVSTMPDFGHPDSKEKTIDLADGRK
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Known secondary structure (DSSP)
TTT

S




SS

SSSSS


















TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence MTVSACCDFLTYVKLGRIKTERKGRDIDLFLKGIRTAEADIPKTGTAHYTGTWEARIGEPIQWDNKADKA
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Known secondary structure (DSSP)



S

SS

B








BTTS

SSS


SSS



GGGGSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AKAEFDVDFGNKSISGTLTEQNGVEPAFRIENGVIEGNGFHATAADNLLVTGGFYGPQAAELGGTIFNKD
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Known secondary structure (DSSP) S

TTTT

SSSSSTTS




B
SS
B





S



SBTTTS
SS
 .........500.........510.........520.........530..
Sequence GKSLGITEDIENEVENEADVGEQLEPEVKPQFGVVFGAKKDN
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Known secondary structure (DSSP) SS
SSSS

S
SSBSSSSSS
B
S









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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