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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7n3pA_

Fold library idPDB HeaderMoleculeTitle
c7n3pA_3.65PDB header: rna binding protein/rna/dnaChain: A: PDB Molecule: cas12k;


Added to library: Sat Sep 4 08:29:05 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSQITIQARLISFESNRQQLWKLMADLNTPLINELLCQLGQHPDFEKWQQKGKLPSTVVSQLCQPLKTDP
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Known secondary structure (DSSP)



TTTT
TTSS


SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFAGQPSRLYMSAIHIVDYIYKSWLAIQKRLQILLTRSSSLPFPLVFETNEDMVWSKNQKGRLCVHFNGL
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Known secondary structure (DSSP) TT
SS








SS



STTSS
SSS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDLIFEVYCGNRQLHWFQRFLEDQQTKRKSKNQHSSGLFTLRNGHLVWLEGEGKGEPWNLHHLTLYCCVD
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Known secondary structure (DSSP) TTS



TTTTTT
S
GGG
S



SSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NRLWTEEGTEIVRQEKADEITKFITNMKSDTQQALIQRKQSTLTRINNSFERPSQPLYQGQSHILVGVSL
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Known secondary structure (DSSP) GGGSS

TTS












 .........290.........300.........310.........320.........330.........340.........350
Sequence GLEKPATVAVVDAIANKVLAYRSIKQLLGDNYELLNRQRRQQQYLSHERHKAASELGQHIDRLLAKAIVA
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Known secondary structure (DSSP)
SSSS

SSS


TTTTT


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LARTYKAGSIVLPKLGDMREVVQSEIQAIAEQKFPGYIEGQQKYAKQYRVNVHRWSYGRLIQSIQSKAAQ
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Known secondary structure (DSSP) TT


STTS
S
S



 .........430.........440.........450....
Sequence TGIVIEEGKQPIRGSPHDKAKELALSAYNLRLTR
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Known secondary structure (DSSP) T





SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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