PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7n04H_

Fold library id	PDB Header	Molecule	Title
c7n04H_	1.70	PDB header: immune system	Chain: H: PDB Molecule: fab f240 heavy chain;

Links to external resources
Added to library: Tue Jun 21 21:15:32 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q V Q L V Q S G G G V V K P G A S L R L A C S A S G F T F T D Y Y M S W I R Q T P G K G L Q W L A Y I T K D G S E K K Y A D S L Q G R F A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G S T T T
T T S
G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S R D N A N N L V F L Q L N T V E D D D T G V Y Y C A R D D G Y Y D R S G Y Y G V F D L W G Q G I R V T V S S A S T K G P S V F P L A P S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T
S
G G G
S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T A A L G C L V K D Y F P E P V T V S W N S G A L T S G V H T F P A V L Q S S G L Y S L S S V V T V P S S S L G T Q T Y I C N V N H K P S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S S
G G G T B
T T
T T S
G G G B T T B
G G G T

. . . . . . . . . 220 . . . . . .

Sequence T K V D K K V E P K S C G R L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	V	Q	L	V	Q	S	G	G	G	V	V	K	P	G	A	S	L	R	L	A	C	S	A	S	G	F	T	F	T	D	Y	Y	M	S	W	I	R	Q	T	P	G	K	G	L	Q	W	L	A	Y	I	T	K	D	G	S	E	K	K	Y	A	D	S	L	Q	G	R	F	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T											S	S		G	G	G	S									T	T	T										T	T	S							G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	R	D	N	A	N	N	L	V	F	L	Q	L	N	T	V	E	D	D	D	T	G	V	Y	Y	C	A	R	D	D	G	Y	Y	D	R	S	G	Y	Y	G	V	F	D	L	W	G	Q	G	I	R	V	T	V	S	S	A	S	T	K	G	P	S	V	F	P	L	A	P	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	T								S			G	G	G															S	S																							B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	A	A	L	G	C	L	V	K	D	Y	F	P	E	P	V	T	V	S	W	N	S	G	A	L	T	S	G	V	H	T	F	P	A	V	L	Q	S	S	G	L	Y	S	L	S	S	V	V	T	V	P	S	S	S	L	G	T	Q	T	Y	I	C	N	V	N	H	K	P	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												B	S	S							G	G	G	T	B		T	T										T	T	S												G	G	G	B	T	T	B									G	G	G	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	T	K	V	D	K	K	V	E	P	K	S	C	G	R	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S