PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7mxdX_

Fold library id	PDB Header	Molecule	Title
c7mxdX_	3.40	PDB header: immune system/viral protein	Chain: X: PDB Molecule: j038 antibody heavy chain;

Links to external resources
Added to library: Tue Jun 21 20:54:34 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q L H L Q E S G P G L V R P S E T L S L T C D V S G G A F N D A Y C S W I R R F P G G G L E W I G R I S G R D G Y V E S N P A L T G R V T M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
S S
S S S
S S S
S S S
B
G G G S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S I D A T W K K I V L R L T S M T A S D T A T Y F C A G E T P E D D F G Y Y Q P Y F K T W G Q G L G V T V S S A S T K G P S V F P L A P C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S S
T T
S T T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T A A L G C L V K D Y F P E P V T V S W N S G S L T S G V H T F P A V L Q S S G L Y S L S S V V T V P S S S L G T Q T Y V C N V N H K P S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T
S S S B
B
T T S
T T S S S S S
T T T

. . . . . . . . . 220 .

Sequence T K V D K R V E I K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	H	L	Q	E	S	G	P	G	L	V	R	P	S	E	T	L	S	L	T	C	D	V	S	G	G	A	F	N	D	A	Y	C	S	W	I	R	R	F	P	G	G	G	L	E	W	I	G	R	I	S	G	R	D	G	Y	V	E	S	N	P	A	L	T	G	R	V	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S			T	T	S										S	S			S	S	S									S	S	S										S	S	S			B				G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	I	D	A	T	W	K	K	I	V	L	R	L	T	S	M	T	A	S	D	T	A	T	Y	F	C	A	G	E	T	P	E	D	D	F	G	Y	Y	Q	P	Y	F	K	T	W	G	Q	G	L	G	V	T	V	S	S	A	S	T	K	G	P	S	V	F	P	L	A	P	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	T	T							S	S			T	T												S			T	T			S																	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	A	A	L	G	C	L	V	K	D	Y	F	P	E	P	V	T	V	S	W	N	S	G	S	L	T	S	G	V	H	T	F	P	A	V	L	Q	S	S	G	L	Y	S	L	S	S	V	V	T	V	P	S	S	S	L	G	T	Q	T	Y	V	C	N	V	N	H	K	P	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S							T	T	T			S	S	S	B						B			T	T	S												T	T	S	S	S	S	S									T	T	T
	.	.	.	.	.	.	.	.	.	220	.
Sequence	T	K	V	D	K	R	V	E	I	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)