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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7mw4A_

Fold library idPDB HeaderMoleculeTitle
c7mw4A_3.42PDB header: viral protein/immune systemChain: A: PDB Molecule: spike glycoprotein;


Added to library: 3.42
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAFDNPVLPFNDGVYFASTSNIIRGWIFGTT
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Known secondary structure (DSSP)

S


B

SS


BS


TT







S


TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLFRVYSSANNCTFEYVSQPFLKNLREFVFKNIDGYFKIY
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Known secondary structure (DSSP) SSTTS


SSS


SS





S


S




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHAAYYVGYLQPRTFLLKYNENGTITDAVDC
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Known secondary structure (DSSP)




SS






B











BSSS


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNC
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Known secondary structure (DSSP) TT
TSS


S



S



S


B

T
S


BSSS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTG
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Known secondary structure (DSSP) B






SB

SS
SGGGGG
S
GGGGGGSSTT

ST



SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence CVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTN
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Known secondary structure (DSSP)


SS
B





SS


TT








SSS

SS


SS
S

B
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIAD
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Known secondary structure (DSSP)
GGGS


SS



S






SSS
TT

B





TT


TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence TTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVNVFQTRAGCLIGAEHVNNSYE
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Known secondary structure (DSSP)

TTT






TTS
S

T

TT



SSS

S

B
 .........570.........580.........590.........600.........610.........620.........630
Sequence CDIPIGAGICASYQQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGD
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Known secondary structure (DSSP)
STT


B










TT




TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence STECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKR
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Known secondary structure (DSSP)
T
T


SS




SS

BTTB

TTTSB
TTSTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence SFIEDLLFNKVTKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGV
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Known secondary structure (DSSP) B


BTT

SS
TTTSS




TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence TQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDIL
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Known secondary structure (DSSP)
TSTTTTGGG

TTSS
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence SRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMS
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Known secondary structure (DSSP) S
TSS


STTTSSSS
 .........920.........930.........940.........950.........960.........970......
Sequence FPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYc7mw4A_
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Known secondary structure (DSSP)
SS
S
SSS
SSSSSS

TTS


B

BS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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