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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mteB_

Fold library idPDB HeaderMoleculeTitle
c7mteB_3.20PDB header: viral proteinChain: B: PDB Molecule: spike glycoprotein;


Added to library: Sat Sep 18 08:40:05 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFNPVLPFNDGVYFASTSNIIRGWIFGTTLQSL
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Known secondary structure (DSSP)

S



SS



S


SS




SS






S




 .........80.........90.........100.........110.........120.........130.........140
Sequence LIVNVVIKVEYVSNLREFVFKNIDGYFKIYSKHTPILPQGFSALEPLVDLPIGINITRFQTLLYYVGYLQ
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Known secondary structure (DSSP)



B



SS




SS












 .........150.........160.........170.........180.........190.........200.........210
Sequence PRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEV
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Known secondary structure (DSSP)

TTS


TTSSTSS


S





B








TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FNDYSVLSPTKLNGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTL
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Known secondary structure (DSSP)


GGG

GGG











SS
TT







TT



TT




SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EILDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIG
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Known secondary structure (DSSP)




TTT




S

SSSTTTTTS
TTTGGGGSSS

SS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence AEHVNNSYECDIPIGAGICASYQQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSV
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Known secondary structure (DSSP)


STT













TT






 .........430.........440.........450.........460.........470.........480.........490
Sequence DCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQIL
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Known secondary structure (DSSP)
TT
TTGGGG
SS


SS




S



TT


TTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PDPSKPSKRSFIEDLLFNKVTLIFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQ
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Known secondary structure (DSSP)

TTSSSS






TT


SS
TTGGGSSS




 .........570.........580.........590.........600.........610.........620.........630
Sequence MAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFG
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Known secondary structure (DSSP) TTTT

SSS



GGG

TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVD
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Known secondary structure (DSSP) SS
S
S
TSS


STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence FCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYE
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Known secondary structure (DSSP) TSSSSTT


S
SSS
SS
SSS

SSS

 .........780.........790.........800..
Sequence PQIITTDNTFVSGNCDVVIGIVNNTVYDPLQP
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Known secondary structure (DSSP)
B

BSSS
S
SSSSTT



B
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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