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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mtcA_

Fold library idPDB HeaderMoleculeTitle
c7mtcA_2.60PDB header: viral proteinChain: A: PDB Molecule: spike glycoprotein;


Added to library: Sat Sep 18 08:40:57 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHNPVLPFNDGVYFASTSNIIRGWIFGTTQSL
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Known secondary structure (DSSP)

TT



SS



S



S

TT






S







S




 .........80.........90.........100.........110.........120.........130.........140
Sequence LIVNNVVIKVCTFEYVSLREFVFKNIDGYFKIYSKHTPLPQGFSALEPLVDLPIGINITRFQTLLAYYVG
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TT





S









S


 .........150.........160.........170.........180.........190.........200.........210
Sequence YLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPF
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Known secondary structure (DSSP)





TTS


BTTSSTSSS

S





B

B








 .........220.........230.........240.........250.........260.........270.........280
Sequence GEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVR
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Known secondary structure (DSSP) S
S



SSS

S

SSSS

SSSS
TTGGGG
B
S




SS
GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence QIAPGQTGKIADYNYKLPDDFTGCVIAWYLYRLFRKSNLKPFERDISTEPLQSVVVLSFELPATVCGPKK
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Known secondary structure (DSSP) GSSTT

SST



SS







SS


SS


















 .........360.........370.........380.........390.........400.........410.........420
Sequence STNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVIT
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Known secondary structure (DSSP)





SSTT





SS
S

TT




TTT





 .........430.........440.........450.........460.........470.........480.........490
Sequence PGTNTSNQVAVLYQDVNCTEVWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQSQSIIA
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Known secondary structure (DSSP)

TTT



T
TTS



TTTSSS

SSS


STT



 .........500.........510.........520.........530.........540.........550.........560
Sequence YTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLN
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Known secondary structure (DSSP)










TT




STT
GGG
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLFNGLTV
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Known secondary structure (DSSP)


SS




SS

STT


TTTS

TTSSS


TT



TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSA
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Known secondary structure (DSSP)

SS
TTGGGTSS




TTT

 .........710.........720.........730.........740.........750.........760.........770
Sequence IGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQIDRLITGR
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Known secondary structure (DSSP) SS



GGG

TTSS
S
STT

 .........780.........790.........800.........810.........820.........830.........840
Sequence LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPA
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Known secondary structure (DSSP) TSS


STTTSSSSTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence QEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDP
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Known secondary structure (DSSP) S
SSS
SSSSSS

TTS


B

BSSS
S
TTSSTT



B
S
 ....
Sequence LQPE
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SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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