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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mpeA_

Fold library idPDB HeaderMoleculeTitle
c7mpeA_3.20PDB header: transport proteinChain: A: PDB Molecule: metal resistance protein ycf1;


Added to library: Sat Jun 5 17:13:34 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LCRSPEGFGPISFYGDFTQCFIDGVILNLSAIFMITFGIRDLVNLCKKKHSGIKYRRNWIIVSRMALVLL
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Known secondary structure (DSSP)


SSS
S
SS
SSSS

TTTTTS




S
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence EIAFVSLASLNISKEEAENFTIVSQYASTMLSLFVALALHWIEYDRSVVANTVLLFYWLFETFGNFAKLI
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Known secondary structure (DSSP) SS



SS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NILIRHTYEGIWYSGQTGFILTLFQVITCASILLLEALPKKPLMPHQHIHQTLTRRKPNPYDSANIFSRI
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Known secondary structure (DSSP) SS
SS
SSS


S

SS


S
SS
SS
B
TTSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence TFSWMSGLMKTGYEKYLVEADLYKLPRNFSSEELSQKLEKNWENELKQKSNPSLSWAICRTFGSKMLLAA
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Known secondary structure (DSSP) TGGGTTS


GGGS
B

TT

TSSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence FFKAIHDVLAFTQPQLLRILIKFVTDYNSERQDHPQKLPIVRGFLIAFAMFLVGFTQTSVLHQYFLNVFN
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Known secondary structure (DSSP) TTT


S


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TGMYIKSALTALIYQKSLVLSNEASGLSSTGDIVNLMSVDVQKLQDLTQWLNLIWSGPFQIIICLYSLYK
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Known secondary structure (DSSP) TTSS
S
STTTTTTTTTGGGTGGGTSTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LLGNSMWVGVIILVIMMPLNSFLMRIQKKLQKSQMKYKDERTRVISEILNNIKSLKLYAWEKPYREKLEE
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Known secondary structure (DSSP) GGGGTSTT
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence VRNNKELKNLTKLGCYMAVTSFQFNIVPFLVSCCTFAVFVYTEDRALTTDLVFPALTLFNLLSFPLMIIP
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Known secondary structure (DSSP) TGGGTSS




T
 .........570.........580.........590.........600.........610.........620.........630
Sequence MVLNSFIEASVSIGRLFTFFTNEELQPDSVQRLPKVKNIGDVAINIGDDATFLWQRKPEYKVALKNINFQ
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Known secondary structure (DSSP) TTS



TTS

S
S
SS

S
SSSSTTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AKKGNLTCIVGKVGSGKTALLSCMLGDLFRVKGFATVHGSVAYVSQVPWIMNGTVKENILFGHRYDAEFY
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Known secondary structure (DSSP) TTS
STTSSTT
SSSS
BS

SS



SSS



 .........710.........720.........730.........740.........750.........760.........770
Sequence EKTIKACALTIDLAILMDGDKTLVGEKGISLSGGQKARLSLARAVYARADTYLLDDPLAAVDEHVARHLI
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Known secondary structure (DSSP) TT
SSSGGG

TTSTT

T
S

GGGS
 .........780.........790.........800.........810.........820.........830.........840
Sequence EHVLGPNGLLHTKTKVLATNKVSALSIADSIALLDNGEITQQGTYDEITKDADSPLWKLLSNEFGDSSES
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Known secondary structure (DSSP) TTSTTSTTTTS


S
SSTT
TTT
TTTTTT










 .........850.........860.........870.........880.........890.........900.........910
Sequence SVRHREQGKVKWNIYLEYAKACNPKSVCVFILFIVISMFLSVMGNVWLKHWSEVNSRYGSNPNAARYLAI
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Known secondary structure (DSSP)











TT
SSS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence YFALGIGSALATLIQTIVLWVFCTIHASKYLHNLMTNSVLRAPMTFFETTPIGRILNRFSNDIYKVDALL
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Known secondary structure (DSSP) TTTTTS
S
TTTTTS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GRTFSQFFVNAVKVTFTITVICATTWQFIFIIIPLSVFYIYYQQYYLRTSRELRRLDSITRSPIYSHFQE
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Known secondary structure (DSSP) T
GGGSTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence TLGGLATVRGYSQQKRFSHINQCRIDNNMSAFYPSINANRWLAYRLELIGSIIILGAATLSVFRLKQGTL
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Known secondary structure (DSSP) S
TTTTTTT
TTTT

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence TAGMVGLSLSYALQITQTLNWIVRMTVEVETNIVSVERIKEYADLKSEAPLIVEGHRPPKEWPSQGDIKF
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Known secondary structure (DSSP)
TTTTTTT



S
S

S


TTSSSSSS

 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NNYSTRYRPELDLVLKHINIHIKPNEKVGIVGRTGAGKSSLTLALFRMIEASEGNIVIDNIAINEIGLYD
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Known secondary structure (DSSP) SSSSS


B

TT


SSSS
TTSSTTTTTSS

STTB
STTS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LRHKLSIIPQDSQVFEGTVRENIDPINQYTDEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSVGQ
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Known secondary structure (DSSP) GGG

SS



SS
SS

S
TT
S

STT


SSSS


TT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence RQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRIIVLDNGK
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Known secondary structure (DSSP) S

SB

SS


STTSB
SSTTSSSTT
 .........1410.........1420........
Sequence VAEFDSPGQLLSDNKSLFYSLCMEAGLV
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Known secondary structure (DSSP)


S
SSSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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