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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mp5A_

Fold library idPDB HeaderMoleculeTitle
c7mp5A_5.60PDB header: antitumor proteinChain: A: PDB Molecule: isoform i of neurofibromin;


Added to library: Sat Dec 18 08:49:35 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPVEWVQAVVSRFDEQLPIKTHTKVSTEHNKECLINISKYKFSLVISGLTTILKNVNNKNLYLSQLIILD
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Known secondary structure (DSSP)
TSTT

TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence TLEKCLAGQPETMLVKQLLPEICHFLQHAAELRNSASGVLFSLSCNNFNAVFSRISTRLQELTVVDVHDI
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Known secondary structure (DSSP) T


T





 .........150.........160.........170.........180.........190.........200.........210
Sequence ELLQYINVDCAKLKRLLKETAFKFKALKKVAQLAVINSLEKAFWNWVENYPDEFTKLYQTDMAECAEKLF
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Known secondary structure (DSSP) S


TTS

T

 .........220.........230.........240.........250.........260.........270.........280
Sequence DLVDGFAESTKRKAAVWPLQIILLILCPEIIQDISKNNMNKKLFLDSLRKALAGHGGSRQLTESAAIACV
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Known secondary structure (DSSP)

ST
T


TT
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence KLCKASTYISVIFLLVQSMVVDLKNLLFNPSKPFSVDLMIDCLVSCFRISPNQHFKICLASPSTFHYVLV
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Known secondary structure (DSSP) T

S
TTS









 .........360.........370.........380.........390.........400.........410.........420
Sequence NSLHRIITNLDWWPKIDAVYCHSVELRNMFGETLHKAVQGDLETRSYKYLLLSMVKLIHADPKLLLCNPG
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Known secondary structure (DSSP)

TTS

GGGGGGS


S


 .........430.........440.........450.........460.........470.........480.........490
Sequence STAELITGLVQLVPQSHMPEIAQEAMEALLVLHQLDSIDLWPVETFWEISSQMLFYICKKLTSSSTEILK
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Known secondary structure (DSSP) TT
TT
TS

T

 .........500.........510.........520.........530.........540.........550.........560
Sequence WLREILICRNKFLLKNPICRQAQTKLEVALYMFLWNPDTEAVLVAMSCFRHLCEEADIRCGVPNYNTFME
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Known secondary structure (DSSP)

T
S


T
 .........570.........580.........590.........600.........610.........620.........630
Sequence FASVRAALQKRVMALLRRIEHPTAGNTEAWEDTHAKWEQATKLILSLQEWINMTGFLCALGGVCLTPVSK
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Known secondary structure (DSSP)



S



GGGG

 .........640.........650.........660.........670.........680.........690.........700
Sequence FMDRLLSLMVCNHEKVGLQIRTNVKDLVGLELSPALYPMLFNKLKNTISKFFDSQGQVLLDTNTQFVEQT
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Known secondary structure (DSSP) T


TTTS
GGGTTB
TT

B


 .........710.........720.........730.........740.........750.........760.........770
Sequence IAIMKNLLDNHTEGSSEHLGQASIETMMLNLVRYVRVLGNMVHAIQIKTKLCQLVEVMMARRDDLSFCQE
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Known secondary structure (DSSP)


TTTTS

S
SSGGGTS

SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence MKFRNKMVEYLTDWVMVKCLTRDLDQASMEAVVSLLAGLPLQPEGVELMEAKSQLFLKYFTLFMNLLNDC
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Known secondary structure (DSSP)


SSS






 .........850.........860.........870.........880.........890.........900.........910
Sequence SGMSRRLASLRHCTVLAMSNLLNANVDSGLMHSIGLGYHKDLQTRATFMEVLTKILQQGFERLVELVTMM
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Known secondary structure (DSSP)



S








 .........920.........930.........940.........950.........960.........970.........980
Sequence GDQGELPIAMALANVVPCSQWDELARVLVTLFDSRHLLYQLLWNMFSKEVELADSMQTLFRGNSLASKIM
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Known secondary structure (DSSP)
TTS

TTS
GGGTT

SSTTTTT
S

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence TFCFKVYGATYLQKLLDPLLRIVITSSDWQHVSFEVDPTRLEPSESLEENQRNLLQMTEKFFHAIISSSS
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Known secondary structure (DSSP) TSS
SS






GGG

SSS
TTGG
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EFPPQLRSVCHCLYQVVSQRFPQNSIGAVGSAMFLRFINPAIVSPYEAGILDKKPPPRIERGLKLMSKIL
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Known secondary structure (DSSP) G

TT

TTTT
TTTTTSSSS


 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence QSIANHVLFTKEEHMRPFNDFVKSNFDAARRFFLDIASDLALHRLLWNNQEKIGQYLRPFDKMATLLAYL
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Known secondary structure (DSSP) T



S
TTSGGGST



TTTTTT



 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence GPPKEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTH
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Known secondary structure (DSSP) S


TTTTTTS
TTS
GGG

BTTB
TTTTTS

TT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence TGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAE
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Known secondary structure (DSSP)

GGG


TTTSS
TS

TTTTTT
TTSSTTGGGG
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence HIEHEQQKLPAATLALEEDLKVFHNALKLAHKDTKVSIKVGSTAVQVTSAERTQSVFLNDIYYASEIEEI
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Known secondary structure (DSSP) TS
GGG



TTSS
SSS

SSS
B


B

GGG
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence CLVDENQFTLTIANQGTPLTFMHQECEAIVQSIIHIRTRWELSQPDVPGTLLNIALLNLGSSDPSLRSAA
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Known secondary structure (DSSP) TTTT

S

TTTS


T
S
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence YNLLCALTCTFNLKIEGQLLETSGLCIPANNTLFIVSISKTLAANEPHLTLEFLEECISGFSKSSIELKH
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Known secondary structure (DSSP) TT


SS




TT



S


TTS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence LCLEYMTPWLSNLVRFCKHNDDAKRQRVTAILDKLITMTINEKQMYPSIQAKIWGSLGQLLDVVLDSFIK
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Known secondary structure (DSSP) S


TTT

 .........1620.........
Sequence TSAIKAEVMADTAVALASG
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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