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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mjrA_

Fold library idPDB HeaderMoleculeTitle
c7mjrA_3.22PDB header: toxinChain: A: PDB Molecule: vip4da1 protein;


Added to library: Sat May 8 08:52:44 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQATVIGLVGFYFKDSTFKELMFIQVGEKSNLMNKARINTDAQQIQSIRWMGNLKSPQTGEYRLSTSSDE
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Known secondary structure (DSSP)



S
SSSTTS
S
STSGGGGSTTGGG


SS

TTGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence NVILQINGETVINQASIQKNLKLEANQVYEIKIEYRNTSNTLPDLQLFWSMNKEQIPEKYILSPNFSEKA
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Known secondary structure (DSSP) GTTSS





TT
SSS












GGG


TTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSLATQSFFPNYNLFSTPVDTDNDCIPDEWEEKGYTFRNQQIVPWNDAYSAEGYKKYVSNPYHARTVKDP
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Known secondary structure (DSSP) S





SS
S








SSSSSS


SS

TT


B


SS
S
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YTDFEKVTGHMPAATKYEARDPLVAAYPSVGVGMEKLHFSKNDTVTEGNADTKSKTTTKTDTTTNTVEIG
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Known secondary structure (DSSP) S
TT
S
TTS
GGGGSTTB




SSS


SSSTTTTGGG



 .........290.........300.........310.........320.........330.........340.........350
Sequence GSLGFSDKGFSFSISPKYTHSWSSSTSVADTDSTTWSSQIGINTAERAYLNANVRYYNGGTAPIYDLKPT
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Known secondary structure (DSSP) S


SBSS




B
SS


SS
TT
SS
T

TTS
SSS
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence TNFVFQNSGDSITTITAGPNQIGNSLGAGDTYPQKGQAPISLDKANEAGTVKIAINAEQLDKIQAGTEIL
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Known secondary structure (DSSP) SSS



TTTS
S
TT
S
TTS

STT




TSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NIETTQNRGQYGILDEKGQVIPGGEWDPIRTNIDAVSGSLTLNLGTGKDSLERRVAAKNMNDPEDKTPEI
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Known secondary structure (DSSP)


S

SSSSST
STTS


B
TT
TT

S


 .........500.........510.........520.........530.........540.........550.........560
Sequence TIKEAIKKAFNAYYYDGRLYYTDQGEKDIFIDEPSINLITDENTKKEIERQLNQMPGKTVYDVKWKRGMK
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Known secondary structure (DSSP) BT
B
SSS



SS



STTTS
TTS
SS

GGGSB
BTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ITLHVPIKYYDFETSLWYYTYQESGGYTGKKRGRIGTDGHGTAMSNPQLKPYTSYTVRAYVRTASTTGSN
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Known secondary structure (DSSP)

S
S



T
B

S

SSSS



SS
SS




TT

SSSS

 .........640.........650.........660.........670.........680.........690.........700
Sequence EVVFYADNSSGNGQGAKVSGKVTGGKWKIAEFSFNTFNNPEYFKIIGLKNNGNANLHFDDVSVIEWKTNE
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Known secondary structure (DSSP) SSSSSSS



SS


S
GGGG
SS





 .........710.........720.........730.........740.........750.........760.........770
Sequence NLQKKHIFEKWSFDEMVIGATFTRVPSSKIRYQWKINGRLGSIIPAPPLDANGKRTVTYGSITAITPMEL
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SS

TT






BTTTB
S
SS


 .........780.........790.........800.........810.........820.........830.........840
Sequence YAVDEKNDNLKVKVAELGESEIEKVMIDAHKFSGWWYLSENPNLYSGLSLYKLPDIFYNNVSSYKIRVNG
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Known secondary structure (DSSP)
SS
TT



S

TT



TT

TT
 .........850.........860.........870.........880.........890.........
Sequence KKVQTVSKPSPFLFQITFNLKNPNGGTYPTKDASVELWATVDLKVLHKWIQKSDVMYSQ
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Known secondary structure (DSSP)







SS

SSTTTTS


TT


B






TTS
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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