Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mixA_

Fold library idPDB HeaderMoleculeTitle
c7mixA_3.00PDB header: transport protein/toxinChain: A: PDB Molecule: voltage-dependent n-type calcium channel subunit alpha-1b;


Added to library: Sat Jul 10 08:56:51 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFV
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)

S



GGG


TTTTTTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence SYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)
GGGS

SS

GGGGGSTT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFFAILMFAIIGLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDN
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) STT
S

SSSSS


SSSS


SSSSS



SS
S



TTTT
SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) TTTSS
SSSSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDRNFRRKEKMFRFFIRRMVKAQSFYWVVLCVVALNT
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)

TTSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LCVAMVHYNQPRRLTTTLYFAEFVFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSVFEVVWAAI
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TT

TT


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence KPGSSFGISVLRALRLLRIFKVTKYWSSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) S
S




GGGGGGGGGGGGGGSS
TTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence FQDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLA
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSSS

SS

SSTTTTTTS
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence IAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLR
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S

SS

SSSSSSS




 .........640.........650.........660.........670.........680.........690.........700
Sequence LQNLRASCEALRRFCHYIVTMRYFEVVILVVIALSSIALAAEDPVRTDSPRNNALKYLDYIFTGVFTFEM
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)


GGGS

SS

SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence VIKMIDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKN
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TTS


SSS


GGGGTGGGST
 .........780.........790.........800.........810.........820.........830.........840
Sequence VLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TTT

SSTT

STTTS
STT


SS

SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence LWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPGYRMELSIFYVVYFVVFPFFFVNIFVALIIITFQE
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) TSS

STT



TTS
STTTTTT


 .........920.........930.........940.........950.........960.........970.........980
Sequence QGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNRQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMK
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
SS
SS
S
SS
SSS







S


SS
T

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence FYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNF
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
TT


TTSTTS



SS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence INLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDDTS
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) S


GGGGGGGGGGGGGGGG
T
TTB


SSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence INRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNQACDEQANATECGSDFAYFYFVSFIFLCSFLMLN
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) SSSSS
SSS
SSSSS
B
B
SSSS
SSB

TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence LFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVA
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) GGGT

SSS

TTTTT

S

S


SS
TTTT
SSTT
 .........1270.........1280.........1290.........1300.........1310.........1320......
Sequence YKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISVVWANLPQKTL
Predicted secondary structure



























SS confidence

































































Known secondary structure (DSSP) SSS

GGGS
SS


TTTSSSS


S
T

STT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D