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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7metB_

Fold library idPDB HeaderMoleculeTitle
c7metB_3.97PDB header: membrane proteinChain: B: PDB Molecule: atp-dependent lipid a-core flippase;


Added to library: Sat Oct 9 12:23:20 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VYLRLISYLKPYWGVALLVLIGFGMNSATEVSVAKLIKFIIDAIQNASRADLDWFPLLIILLVFFRGLGL
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Known secondary structure (DSSP)
TGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FMGGYYTAVISRSLVFSIRQEVYAKLLRLPAQYYLDNSSGHITAKIMYNVEQLTAASSESLKTIVRDGMI
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Known secondary structure (DSSP) S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TLGLLGYLFYTNWRLTICIAGEFVAYITAAGLLSKPVKNLTDVNEKLQRGLAAAHSVFELLDLPEEQNSG
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Known secondary structure (DSSP) T


TTT

TTTTTTS




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELKPQLQGAIRFDHVVLNYADGTQAIKDFSLDIRPGETVALVGRSGAGKTSLVNMLVRFQEVSSGQIYLD
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TTT



SS


TT

TTTSS

SS



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DLPIRDIELSSLRTQIAMVNQQVVLFNRTVRENIAYGQLHNASDEDVIAAAKAAYAHDFIMNLPNGYDTV
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Known secondary structure (DSSP) S

SS
S

SS



SS
TSS
STT

TTTSS
STT

 .........360.........370.........380.........390.........400.........410.........420
Sequence LGAQGLNLSGGQRQRIAIARAILKNAPILILDEATSALDNESEHFIQQAFDEAMQDRTTIVIAHRLSTIE
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Known secondary structure (DSSP)

GGGTSS


S

SSS
S

TTTTS



 .........430.........440.........450.....
Sequence NADRIVVMDRGQIVEQGTHQELLAKHGAYYQLHQR
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Known secondary structure (DSSP)
STT
SBT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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