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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mdhA_

Fold library idPDB HeaderMoleculeTitle
c7mdhA_PDB header: chloroplastic malate dehydrogenaseChain: A: PDB Molecule: protein (malate dehydrogenase);PDBTitle: structural basis for light acitvation of a chloroplast2 enzyme. the structure of sorghum nadp-malate dehydrogenase3 in its oxidized form


Added to library: Tue Mar 16 13:58:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DCFGVFCTWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY
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Known secondary structure (DSSP)


GGG





TTTSTTTT
TT



GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP
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Known secondary structure (DSSP) TTS
TTT
S






TT

S
TT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CNTNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDG
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Known secondary structure (DSSP) T
TTS
GGG

TTS
GGG

B
SSTT

SS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RPVKEVIKRTKWLEEEFTITVQKRGGALIQKWGRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGN
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Known secondary structure (DSSP) GGGT


TTSS

S


TT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence PYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAELLAEKKCVAHLTGEGNAYCDVPEDTM
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Known secondary structure (DSSP) SS


SSS

SSS








TTSSS





STT
 .
Sequence L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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