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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7mbqB_

Fold library idPDB HeaderMoleculeTitle
c7mbqB_2.30PDB header: transport proteinChain: B: PDB Molecule: transient receptor potential melastatin 5;


Added to library: Sat Jul 10 08:54:18 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLGDIDFTGVSRTRGKFVRVTSSTDPAEIYQILTKQWGLAPPHLVVALMGGDEVAQLKPWLRDTLRKGLV
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Known secondary structure (DSSP)
SSS

TTS
TTT




S

SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence KAAQSTGAWILTSGLRFGITKNLGQAVRDHSLASTSPKVRVVAIGIAPWNMIQNRDLLLSAKPDHPATYP
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Known secondary structure (DSSP) SS


BSS
S

SS
GGGBTTS


SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TEDLPYGAVYSLDCNHSHFILVDEDPKRPGATGEMRVKMLKHISLQRTGYGGTGSIEIPVLCLLVHGEPR
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Known secondary structure (DSSP)




SSS
B
B
TT




SS
S
T
TTT

S

GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILQKMYKNIQNSIPWLILAGSGGVADILVTLMDRGCWDADIVQELLINTFPDGLHSTEITSWTKLIQRIL
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Known secondary structure (DSSP) GTT

TTSSSS



TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence DHGHLLTVHDPEQDSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSEIFSGDVQWSAQD
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Known secondary structure (DSSP)
TT
TTTT




SGGGT
TTTSSSS


TGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LEEVMMEALVNDKPDFVRLFVDNGVNIKQFLTYGRLQELYCSVSEKNLLHTLLLKKNQERQAQLKFRFTF
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Known secondary structure (DSSP) GTT
TT


B


SSS


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence HEVSKVLKDFLDDTCKGFYQKLNLPDMDRRCEHPWRDLFLWAILQNRQEMANYFWAMGPEAVAAALVGCK
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Known secondary structure (DSSP) TTTSSS
TTSSS





TTSB
SSTT
T
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence IMKEMAHLATEAESARSMKNAKYEQFAMDLFSECYSNSEDRAYSLLVRKTCCWSKATVLNIATLAEAKCF
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Known secondary structure (DSSP)
SSSS

TSSBB
TTTTS
BT
 .........570.........580.........590.........600.........610.........620.........630
Sequence FAHDGVQALLTKVWWGAMRTDTSISRLVLTFFIPPLVWTSLIKFNPESATFIRVVLRRWNRFWSAPVTVF
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Known secondary structure (DSSP) TSTTB
TT

SGGGGGSTTS
B



TS
 .........640.........650.........660.........670.........680.........690.........700
Sequence MGNVIMYFAFLILFSYVLLLDFRPPPPYGPSAAEIILYFWVFTLVLEEIRQSFFTDEDMSILKKMKLYVE
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Known secondary structure (DSSP) T



STTT


SSSS


 .........710.........720.........730.........740.........750.........760.........770
Sequence DNWNKCDMVAISLFVVGLSCRMAMSTYEAGRTVLALDFMVFTLRLIHIFAIHKQLGPKIIIVERMIKDVF
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Known secondary structure (DSSP) STSGGGGGGGGGGSTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence FFLFFLSVWLIAYGVTTQALLHPNDPRIDWVFRRALYRPYLHIFGQIPLEEIDAAKMPDDNCTTDVQEII
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Known secondary structure (DSSP)
TT


TTT


GGGT
GGG





B

 .........850.........860.........870.........880.........890.........900.........910
Sequence LGTLPPCPNIYANWLVILLLVIYLLVTNVLLLNLLIAMFSYTFQVVQENADIFWKFQRYNLIVEYHSRPA
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Known secondary structure (DSSP) TSS
B



TTTTSS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence LAPPFIIISHITQALLSFIKDLLERELPSGLDQKLMTWETVQKENYLAKLEHEHRESSGERLRYTSSKVQ
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Known secondary structure (DSSP) S
SST


SSB


TS
 .........990......
Sequence TLLRMVGGFKDQEKRM
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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