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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7m5sA_

Fold library idPDB HeaderMoleculeTitle
c7m5sA_3.26PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase;


Added to library: Sat Mar 25 10:51:52 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPTQRHTYYSECDEFRFIAPRVLDEDAPPEKRAGVHDGHLKRAPKVYCGGDERDVLRVGSGGFWPRRSRL
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Known secondary structure (DSSP)

SS


S
S

S

TTS
SSS
GGGSSS

S

TTTT


SS
SS



SB
 .........80.........90.........100.........110.........120.........130.........140
Sequence WGGVDHAPAGFNPTVTVFHVYDILENVEHAYGMRAAQFHARFMDAITPTGTVITLLGLTPEGHRVAVHVY
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Known secondary structure (DSSP) SSSSB
S
SS




SS





TTTTSTT


TSS


TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence GTRQYFYMNKEEVDRHLQCRAPRDLCERMAAALRESPGASFRGISADHFEAEVVERTDVYYYETRPALFY
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Known secondary structure (DSSP)


STTTT

TTSSSSTTS



GGGG


B
SS
TTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence RVYVRSGRVLSYLCDNFCPAIKKYEGGVDATTRFILDNPGFVTFGWYRLKPGRNNTLAQPRAPMAFGTSS
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Known secondary structure (DSSP)

SS
TTS

TTTT

STT

SSS




TTT




GGG

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DVEFNCTADNLAIEGGMSDLPAYKLMCFDIECKAGGEDELAFPVAGHPEDLVIQISCLLYDLSTTALEHV
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Known secondary structure (DSSP) S

GGG

SS



TT




SSSS




TT
TTSSSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence LLFSLGSCDLPESHLNELAARGLPTPVVLEFDSEFEMLLAFMTLVKQYGPEFVTGYNIINFDWPFLLAKL
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Known secondary structure (DSSP) S




TT



SST

S

SSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence TDIYKVPLDGYGRMNGRGVFRVWDFQKRSKIKVNGMVNIDMYGIITDKIKLSSYKLNAVAEAVLKDKKKD
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Known secondary structure (DSSP) TS



TTSSSSSSS




TT
TT


S


S


T





 .........500.........510.........520.........530.........540.........550.........560
Sequence LSYRDIPAYYATGPAQRGVIGEYCIQDSLLVGQLFFKFLPHLELSAVARLAGINITRTIYDGQQIRVFTC
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Known secondary structure (DSSP)

TTS

SS
S
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LLRLADQKGFILPDTQGRFRGAGGQGARVLDPTSGFHVNPVVVFDFASLYPSIIQAHNLCFSTLSLRADA
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Known secondary structure (DSSP) TTB




S








TTGGGS




S


BTTTT
STTT

SSGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence VAHLEAGKDYLEIEVGGRRLFFVKAHVRESLLSILLRDWLAMRKQIRSRIPQSSPEEAVLLDKQQAAIKV
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Known secondary structure (DSSP) GTTS
SSSS


SSS




TTT


TTSTTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence VCNSVYGFTGVQHGLLPCLHVAATVTTIGREMLLATREYVHARWAAFEQLLADFPEAADMRAPGPYSMRI
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Known secondary structure (DSSP) TSTTSSS

TTTS
GGGSTTB
SS

B

 .........780.........790.........800.........810.........820.........830.........840
Sequence IYGDTDSIFVLCRGLTAAGLTAMGDKMASHISRALFLPPIKLECEKTFTKLLLIAKKKYIGVIYGGKMLI
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Known secondary structure (DSSP) TT
BTB
STTTS
TT

B



SSS
TTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence KGVDLVRKNNCAFINRTSRALVDLLFYDDTVSGAAAALAERPAEEWLARPLPEGLQAFGAVLVDAHRRIT
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Known secondary structure (DSSP) S

S

TTS
STTTTTSS
TTS


GGG
 .........920.........930.........940.........950.........960.........970.........980
Sequence DPERDIQDFVLTAELSRHPRAYTNKRLAHLTVYYKLMARRAQVPSIKDRIPYVIVAQTREVEETVARLAA
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Known secondary structure (DSSP) STT


S








S
TT

TT


TTTT




TT










TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LRELDAASKPRKLLVSELAEDPAYAIAHGVALNTDYYFSHLLGAACVTFKALFGNNAKITESLLKRFIPE
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Known secondary structure (DSSP) TSTT




SS

GGG



T

S

TGGGTT
GGGS

 .........1060.........1070.........1080.........1090.
Sequence VWHPPDDVAARLRAAGFGAVGAGATAEETRRMLHRAFDTLA
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Known secondary structure (DSSP)




TT



SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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