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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7m0rC_

Fold library idPDB HeaderMoleculeTitle
c7m0rC_3.70PDB header: signaling proteinChain: C: PDB Molecule: semaphorin-3a;


Added to library: Sat May 8 09:00:28 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVPRLKLSYKEMLESNNVITFNGLANSSSYHTFLLDEERSRLYVGAKDHIFSFNLVNIKDFQKIVWPVSY
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Known secondary structure (DSSP)


S
TT




TT





TTTT
BSSS
TTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence TRRDECKWKGKDILKECANFIKVLEAYNQTHLYACGTGAFHPICTYIEVGHHPEDNIFKLQDSHFENGRG
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Known secondary structure (DSSP) TS
TTTTSS
SSSTT

SSGGG




S


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSPYDPKLLTASLLIDGELYSGTAADFMGRDFAIFRTLGHHHPIRTEQHDSRWLNDPRFISAHLIPESDN
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Known secondary structure (DSSP) TS
SSSSS

TT
SSSS

SSSS



SS
TTT
SS


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PEDDKVYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDE
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Known secondary structure (DSSP) GGG

SSSSSSS

TT



SSSSTTB
SS
B


SSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence LQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGPNYQWVPYQGRVPYPR
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Known secondary structure (DSSP)

SSTTS

S
SSS

TS
B


SSTTS





S


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVDAEDGQYD
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Known secondary structure (DSSP) TT



SSS
S

SGGGS


BBSS
B

GGGS
S
SSS


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VMFIGTDVGTVLKVVSVPLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKA
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Known secondary structure (DSSP) SSS






SSS




TTTT
SS
S


GGG
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence CAECCLARDPYCAWDGSSCSRYFPGDPLTHCSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S

SS
SSS




STTTS










S
TTS



 .........570.........580........
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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